Skip Header

Contribute Send feedback
Read comments (?) or add your own

P62521 (CCDC8_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified March 6, 2013. Version 46. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Coiled-coil domain-containing protein 8
Gene names
Name:Ccdc8
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length643 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Miscellaneous

Does not contain a coiled coil domain.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 643643Coiled-coil domain-containing protein 8
PRO_0000089402

Regions

Compositional bias294 – 508215Ala-rich

Amino acid modifications

Modified residue1411Phosphoserine By similarity
Modified residue1441Phosphoserine By similarity

Sequences

Sequence LengthMass (Da)Tools
P62521 [UniParc].

Last modified July 19, 2004. Version 1.
Checksum: 0028464DAE8E9632

FASTA64369,589
        10         20         30         40         50         60 
MLQIGEDVDY LLIPREVRLA GGVWRVISKP ATKEAVFRER LIQFLQEEGR TLEDVARIIE 

        70         80         90        100        110        120 
KSTPHPPQPP KKAKVPRVRR VPQMVTPPLR LVVGTYDSSN GSDSELSDFD TSKVKGNRGS 

       130        140        150        160        170        180 
GKTRKVRKMP VSYLGSKFLG SDESEDDQEL VEAFLRRGEK KPSAPPPRRR VNLPVPMFEN 

       190        200        210        220        230        240 
NLGPQPSKGD RWREYVSQVS WGKLKQRVRG WAPRSGSEVG QAQQSSIAER AGEMRHSHTS 

       250        260        270        280        290        300 
PDLDDSSRNT GDLSDQTLIT RRWKPKIKWV SLRRCRKEQV PPLAHGTAEE PPEAAENQGA 

       310        320        330        340        350        360 
GAAAEHGVEA AASQRPEAAA SPRAEAAANP RAEATANPRA EAAANPRAEA AASPRAEAAA 

       370        380        390        400        410        420 
NPRAEAAANP RAEATANPRA EAAANPRAEA TANPRAEAAV NPRTEAAVNP RTEAAANPRA 

       430        440        450        460        470        480 
EAAVNPRAEA TASPRAEAEV NQKTEATASP RAETAASPRV EAAASLRVEA AASPRAEATV 

       490        500        510        520        530        540 
SPRAEAVATP RAETAASARV EAAANLRAGV LPDQRAEAID SQRAEGPVNQ STGATENQRV 

       550        560        570        580        590        600 
EVLADQRAGV LHDQREEAGP QAILEASADS GSRARKQVKT VRFQTPGRFS WFHMRRKAFW 

       610        620        630        640 
HTPRLPTLPK RGPRAGAGEA RSLRVLRADT RADMEHREQE EQL

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Prostate.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC060520 mRNA. Translation: AAH60520.1.
IPIIPI00421633.
RefSeqNP_001009533.2. NM_001009533.2.
UniGeneRn.145404.

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEP62521.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID494320.
KEGGrno:494320.
UCSCRGD:1359717. rat.

Organism-specific databases

CTD83987.
RGD1359717. Ccdc8.

Phylogenomic databases

HOVERGENHBG050825.
InParanoidP62521.

Gene expression databases

GenevestigatorP62521.
GermOnlineENSRNOG00000027936. Rattus norvegicus.

Family and domain databases

InterProIPR026526. Coiled-coil_p8.
IPR026523. PNMA.
[Graphical view]
PANTHERPTHR23095. PTHR23095. 1 hit.
PTHR23095:SF2. PTHR23095:SF2. 1 hit.
ProtoNetSearch...

Other

NextBio697591.

Entry information

Entry nameCCDC8_RAT
AccessionPrimary (citable) accession number: P62521
Secondary accession number(s): Q6P9Z5
Entry history
Integrated into UniProtKB/Swiss-Prot: July 19, 2004
Last sequence update: July 19, 2004
Last modified: March 6, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info