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P62442 (RL11_THET2) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 62. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L11
Gene names
Name:rplK
Ordered Locus Names:TT_C1738
OrganismThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) [Complete proteome] [HAMAP]
Taxonomic identifier262724 [NCBI]
Taxonomic lineageBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

Protein attributes

Sequence length147 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors By similarity. HAMAP-Rule MF_00736

Subunit structure

Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex By similarity.

Post-translational modification

One or more lysine residues are methylated By similarity. HAMAP-Rule MF_00736

Sequence similarities

Belongs to the ribosomal protein L11P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMMethylation
   Technical term3D-structure
Complete proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionLSU rRNA binding

Inferred from electronic annotation. Source: UniProtKB-HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 14714750S ribosomal protein L11 HAMAP-Rule MF_00736
PRO_0000104398

Secondary structure

..................................... 147
Helix Strand Turn

Details...

Sequences

Sequence LengthMass (Da)Tools
P62442 [UniParc].

Last modified July 5, 2004. Version 1.
Checksum: 3D8DECEBE85B5FE9

FASTA14715,505
        10         20         30         40         50         60 
MKKVVAVVKL QLPAGKATPA PPVGPALGQH GANIMEFVKA FNAATANMGD AIVPVEITIY 

        70         80         90        100        110        120 
ADRSFTFVTK TPPASYLIRK AAGLEKGAHK PGREKVGRIT WEQVLEIAKQ KMPDLNTTDL 

       130        140 
EAAARMIAGS ARSMGVEVVG APEVKDA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE017221 Genomic DNA. Translation: AAS82080.1.
RefSeqYP_005707.1. NC_005835.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4KBUX-ray3.86K2-141[»]
4KBWX-ray3.86K2-141[»]
4KCZX-ray3.50K2-141[»]
4KD2X-ray3.50K2-141[»]
4KD9X-ray3.50K2-141[»]
4KDBX-ray3.50K2-141[»]
4KDHX-ray4.00K2-141[»]
4KDKX-ray4.00K2-141[»]
4KFIX-ray3.40K1-147[»]
4KFLX-ray3.40K1-147[»]
ProteinModelPortalP62442.
SMRP62442. Positions 1-147.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAS82080; AAS82080; TT_C1738.
GeneID2775642.
KEGGtth:TTC1738.
PATRIC23953941. VBITheThe54392_1737.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0080.
KOK02867.
OMAFKIESAM.
OrthoDBEOG69PQ9D.

Enzyme and pathway databases

BioCycTTHE262724:GCAT-1775-MONOMER.

Family and domain databases

Gene3D1.10.10.250. 1 hit.
3.30.1550.10. 1 hit.
HAMAPMF_00736. Ribosomal_L11.
InterProIPR000911. Ribosomal_L11/L12.
IPR006519. Ribosomal_L11_bac-typ.
IPR020783. Ribosomal_L11_C.
IPR020785. Ribosomal_L11_CS.
IPR020784. Ribosomal_L11_N.
[Graphical view]
PANTHERPTHR11661. PTHR11661. 1 hit.
PfamPF00298. Ribosomal_L11. 1 hit.
PF03946. Ribosomal_L11_N. 1 hit.
[Graphical view]
SMARTSM00649. RL11. 1 hit.
[Graphical view]
SUPFAMSSF46906. SSF46906. 1 hit.
SSF54747. SSF54747. 1 hit.
TIGRFAMsTIGR01632. L11_bact. 1 hit.
PROSITEPS00359. RIBOSOMAL_L11. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL11_THET2
AccessionPrimary (citable) accession number: P62442
Entry history
Integrated into UniProtKB/Swiss-Prot: July 5, 2004
Last sequence update: July 5, 2004
Last modified: May 14, 2014
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

PDB cross-references

Index of Protein Data Bank (PDB) cross-references