Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

P62442

- RL11_THET2

UniProt

P62442 - RL11_THET2

Protein

50S ribosomal protein L11

Gene

rplK

Organism
Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 64 (01 Oct 2014)
      Sequence version 1 (05 Jul 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.UniRule annotation

    GO - Molecular functioni

    1. large ribosomal subunit rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciTTHE262724:GCAT-1775-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L11UniRule annotation
    Gene namesi
    Name:rplKUniRule annotation
    Ordered Locus Names:TT_C1738
    OrganismiThermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
    Taxonomic identifieri262724 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
    ProteomesiUP000000592: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 14714750S ribosomal protein L11PRO_0000104398Add
    BLAST

    Post-translational modificationi

    One or more lysine residues are methylated.UniRule annotation

    Keywords - PTMi

    Methylation

    Interactioni

    Subunit structurei

    Part of the ribosomal stalk of the 50S ribosomal subunit. Interacts with L10 and the large rRNA to form the base of the stalk. L10 forms an elongated spine to which L12 dimers bind in a sequential fashion forming a multimeric L10(L12)X complex.UniRule annotation

    Structurei

    Secondary structure

    1
    147
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi9 – 113
    Beta strandi13 – 153
    Helixi23 – 264
    Turni28 – 314
    Turni34 – 363
    Helixi38 – 403
    Beta strandi45 – 484
    Beta strandi55 – 573
    Beta strandi61 – 633
    Helixi74 – 763
    Helixi78 – 814
    Turni91 – 933
    Beta strandi97 – 993
    Helixi103 – 1064
    Helixi107 – 1115
    Turni112 – 1143
    Beta strandi115 – 1173
    Helixi122 – 13211
    Turni133 – 1353
    Beta strandi141 – 1433

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    4KBUX-ray3.86K2-141[»]
    4KBWX-ray3.86K2-141[»]
    4KCZX-ray3.50K2-141[»]
    4KD2X-ray3.50K2-141[»]
    4KD9X-ray3.50K2-141[»]
    4KDBX-ray3.50K2-141[»]
    4KDHX-ray4.00K2-141[»]
    4KDKX-ray4.00K2-141[»]
    4KFIX-ray3.40K1-147[»]
    4KFLX-ray3.40K1-147[»]
    ProteinModelPortaliP62442.
    SMRiP62442. Positions 1-147.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L11P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0080.
    KOiK02867.
    OMAiFKIESAM.
    OrthoDBiEOG69PQ9D.

    Family and domain databases

    Gene3Di1.10.10.250. 1 hit.
    3.30.1550.10. 1 hit.
    HAMAPiMF_00736. Ribosomal_L11.
    InterProiIPR000911. Ribosomal_L11/L12.
    IPR006519. Ribosomal_L11_bac-typ.
    IPR020783. Ribosomal_L11_C.
    IPR020785. Ribosomal_L11_CS.
    IPR020784. Ribosomal_L11_N.
    [Graphical view]
    PANTHERiPTHR11661. PTHR11661. 1 hit.
    PfamiPF00298. Ribosomal_L11. 1 hit.
    PF03946. Ribosomal_L11_N. 1 hit.
    [Graphical view]
    SMARTiSM00649. RL11. 1 hit.
    [Graphical view]
    SUPFAMiSSF46906. SSF46906. 1 hit.
    SSF54747. SSF54747. 1 hit.
    TIGRFAMsiTIGR01632. L11_bact. 1 hit.
    PROSITEiPS00359. RIBOSOMAL_L11. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P62442-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKVVAVVKL QLPAGKATPA PPVGPALGQH GANIMEFVKA FNAATANMGD    50
    AIVPVEITIY ADRSFTFVTK TPPASYLIRK AAGLEKGAHK PGREKVGRIT 100
    WEQVLEIAKQ KMPDLNTTDL EAAARMIAGS ARSMGVEVVG APEVKDA 147
    Length:147
    Mass (Da):15,505
    Last modified:July 5, 2004 - v1
    Checksum:i3D8DECEBE85B5FE9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82080.1.
    RefSeqiWP_011174097.1. NC_005835.1.
    YP_005707.1. NC_005835.1.

    Genome annotation databases

    EnsemblBacteriaiAAS82080; AAS82080; TT_C1738.
    GeneIDi2775642.
    KEGGitth:TTC1738.
    PATRICi23953941. VBITheThe54392_1737.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE017221 Genomic DNA. Translation: AAS82080.1 .
    RefSeqi WP_011174097.1. NC_005835.1.
    YP_005707.1. NC_005835.1.

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    4KBU X-ray 3.86 K 2-141 [» ]
    4KBW X-ray 3.86 K 2-141 [» ]
    4KCZ X-ray 3.50 K 2-141 [» ]
    4KD2 X-ray 3.50 K 2-141 [» ]
    4KD9 X-ray 3.50 K 2-141 [» ]
    4KDB X-ray 3.50 K 2-141 [» ]
    4KDH X-ray 4.00 K 2-141 [» ]
    4KDK X-ray 4.00 K 2-141 [» ]
    4KFI X-ray 3.40 K 1-147 [» ]
    4KFL X-ray 3.40 K 1-147 [» ]
    ProteinModelPortali P62442.
    SMRi P62442. Positions 1-147.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAS82080 ; AAS82080 ; TT_C1738 .
    GeneIDi 2775642.
    KEGGi tth:TTC1738.
    PATRICi 23953941. VBITheThe54392_1737.

    Phylogenomic databases

    eggNOGi COG0080.
    KOi K02867.
    OMAi FKIESAM.
    OrthoDBi EOG69PQ9D.

    Enzyme and pathway databases

    BioCyci TTHE262724:GCAT-1775-MONOMER.

    Family and domain databases

    Gene3Di 1.10.10.250. 1 hit.
    3.30.1550.10. 1 hit.
    HAMAPi MF_00736. Ribosomal_L11.
    InterProi IPR000911. Ribosomal_L11/L12.
    IPR006519. Ribosomal_L11_bac-typ.
    IPR020783. Ribosomal_L11_C.
    IPR020785. Ribosomal_L11_CS.
    IPR020784. Ribosomal_L11_N.
    [Graphical view ]
    PANTHERi PTHR11661. PTHR11661. 1 hit.
    Pfami PF00298. Ribosomal_L11. 1 hit.
    PF03946. Ribosomal_L11_N. 1 hit.
    [Graphical view ]
    SMARTi SM00649. RL11. 1 hit.
    [Graphical view ]
    SUPFAMi SSF46906. SSF46906. 1 hit.
    SSF54747. SSF54747. 1 hit.
    TIGRFAMsi TIGR01632. L11_bact. 1 hit.
    PROSITEi PS00359. RIBOSOMAL_L11. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HB27 / ATCC BAA-163 / DSM 7039.

    Entry informationi

    Entry nameiRL11_THET2
    AccessioniPrimary (citable) accession number: P62442
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 5, 2004
    Last sequence update: July 5, 2004
    Last modified: October 1, 2014
    This is version 64 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure, Complete proteome

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3