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Reviewed, UniProtKB/Swiss-Prot P62273 (RS29_HUMAN)

Last modified June 16, 2009. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (4) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    40S ribosomal protein S29
Gene names
Name: RPS29
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length56 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at protein level.

General annotation (Comments)

Cofactor

Binds 1 zinc ion per subunit Potential.

Sequence similarities

Belongs to the ribosomal protein S14P family.

Ontologies

Keywords
   LigandMetal-binding
Zinc
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termDirect protein sequencing
Gene Ontology (GO)
   Biological processtranslational elongation

Inferred from Experiment. Source: Reactome

   Cellular componentcytosolic small ribosomal subunit Ref.5

Inferred from direct assay. Source: UniProtKB

   Molecular functionprotein binding

Inferred from physical interaction. Source: IntAct

structural constituent of ribosome

Inferred from direct assay. Source: UniProtKB

zinc ion binding Ref.2

Inferred from direct assay. Source: UniProtKB

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Initiator methionine11Removed Ref.5 Ref.6
Chain2 – 565540S ribosomal protein S29
PRO_0000131019

Sites

Metal binding211Zinc Potential
Metal binding241Zinc Potential
Metal binding391Zinc Potential
Metal binding421Zinc Potential

Sequences

Sequence LengthMass (Da)Tools
P62273-1 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 41325122B493EFF9

FASTA566,677
        10         20         30         40         50 
MGHQQLYWSH PRKFGQGSRS CRVCSNRHGL IRKYGLNMCR QCFRQYAKDI GFIKLD 

« Hide

References

« Hide 'large scale' references
[1]"Cloning, sequencing and expression of the L5, L21, L27a, L28, S5, S9, S10 and S29 human ribosomal protein mRNAs."
Frigerio J.-M., Dagorn J.-C., Iovanna J.L.
Biochim. Biophys. Acta 1262:64-68(1995) [PubMed: 7772601] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Colon.
[2]"The S29 ribosomal protein increases tumor suppressor activity of K rev-1 gene on v-K ras-transformed NIH3T3 cells."
Kondoh N., Noda M., Fisher R.J., Schweinfest C.W., Papas T.S., Kondoh A., Samuel K.P., Oikawa T.
Biochim. Biophys. Acta 1313:41-46(1996) [PubMed: 8781548] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Tissue: Colon.
[3]"The human ribosomal protein genes: sequencing and comparative analysis of 73 genes."
Yoshihama M., Uechi T., Asakawa S., Kawasaki K., Kato S., Higa S., Maeda N., Minoshima S., Tanaka T., Shimizu N., Kenmochi N.
Genome Res. 12:379-390(2002) [PubMed: 11875025] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Blood and Eye.
[5]"Characterization of the human small-ribosomal-subunit proteins by N-terminal and internal sequencing, and mass spectrometry."
Vladimirov S.N., Ivanov A.V., Karpova G.G., Musolyamov A.K., Egorov T.A., Thiede B., Wittmann-Liebold B., Otto A.
Eur. J. Biochem. 239:144-149(1996) [PubMed: 8706699] [Abstract]
Cited for: PROTEIN SEQUENCE OF 2-11.
Tissue: Placenta.
[6]Bienvenut W.V., Murray L., Brunton V.G., Frame M.C.
Submitted (FEB-2008) to UniProtKB
Cited for: PROTEIN SEQUENCE OF 2-12 AND 49-56, CLEAVAGE OF INITIATOR METHIONINE, MASS SPECTROMETRY.
Tissue: Colon adenocarcinoma.
[7]"A map of 75 human ribosomal protein genes."
Kenmochi N., Kawaguchi T., Rozen S., Davis E., Goodman N., Hudson T.J., Tanaka T., Page D.C.
Genome Res. 8:509-523(1998) [PubMed: 9582194] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 29-54.
[8]Colinge J., Superti-Furga G., Bennett K.L.
Submitted (OCT-2008) to UniProtKB
Cited for: IDENTIFICATION [LARGE SCALE ANALYSIS], MASS SPECTROMETRY.
+Additional computationally mapped references.

Cross-references

Sequence databases

U14973 mRNA. Translation: AAA85661.1.
L31610 mRNA. Translation: AAB27426.1.
AB061847 Genomic DNA. Translation: BAB79485.1.
BC032813 mRNA. Translation: AAH32813.1.
BC035313 mRNA. Translation: AAH35313.1.
AB007165 Genomic DNA. Translation: BAA25827.1.
IPIIPI00182289.
PIRS55919.
RefSeqNP_001023.1.
UniGeneHs.156367

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActP62273. 10 interactions.

Proteomic databases

PRIDEP62273.

Genome annotation databases

EnsemblENSG00000213741. Homo sapiens. [Contig view]
GeneID6235.

Organism-specific databases

GeneCardsGC03P197747.
GC04P025289.
GC07P102776.
GC14M049119.
GC14M049121.
HGNCHGNC:10419. RPS29.
HPAHPA004107.
MIM603633. gene.
PharmGKBPA34826.
GenAtlasSearch...

Phylogenomic databases

HOVERGENP62273.

Enzyme and pathway databases

ReactomeREACT_1762. 3' -UTR-mediated translational regulation.
REACT_6167. Influenza Infection.
REACT_71. Gene Expression.

Gene expression databases

ArrayExpressP62273.
BgeeP62273.
CleanExHS_RPS29.
GermOnlineENSG00000125385. Homo sapiens.

Family and domain databases

InterProIPR001209. Ribosomal_S14.
IPR018271. Ribosomal_S14_CS.
[Graphical view]
PfamPF00253. Ribosomal_S14. 1 hit.
[Graphical view]
PROSITEPS00527. RIBOSOMAL_S14. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

NextBio24205.
SOURCESearch...

Entry information

Entry nameRS29_HUMAN
AccessionPrimary (citable) accession number: P62273
Secondary accession number(s): P30054
Entry history
Integrated into UniProtKB/Swiss-Prot: July 5, 2004
Last sequence update: January 23, 2007
Last modified: June 16, 2009
This is version 48 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 14

Human chromosome 14: entries, gene names and cross-references to MIM

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents