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Protein

40S ribosomal protein S15a

Gene

Rps15a

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-RNO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-RNO-6791226 Major pathway of rRNA processing in the nucleolus and cytosol
R-RNO-72649 Translation initiation complex formation
R-RNO-72689 Formation of a pool of free 40S subunits
R-RNO-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-RNO-72702 Ribosomal scanning and start codon recognition
R-RNO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S15a
Gene namesi
Name:Rps15a
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 1

Organism-specific databases

RGDi619939 Rps15a

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001266042 – 13040S ribosomal protein S15aAdd BLAST129

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei88N6-succinyllysineBy similarity1

Proteomic databases

PaxDbiP62246
PRIDEiP62246

Expressioni

Gene expression databases

BgeeiENSRNOG00000018320
GenevisibleiP62246 RN

Interactioni

Protein-protein interaction databases

BioGridi250650, 1 interactor
IntActiP62246, 3 interactors
MINTiP62246
STRINGi10116.ENSRNOP00000024678

Structurei

3D structure databases

ProteinModelPortaliP62246
SMRiP62246
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG1754 Eukaryota
COG0096 LUCA
GeneTreeiENSGT00390000005707
HOGENOMiHOG000204097
HOVERGENiHBG056618
InParanoidiP62246
KOiK02957
OMAiYGIMDHE
OrthoDBiEOG091G0TSE
PhylomeDBiP62246
TreeFamiTF300067

Family and domain databases

HAMAPiMF_01302_A Ribosomal_S8_A, 1 hit
InterProiView protein in InterPro
IPR000630 Ribosomal_S8
IPR035987 Ribosomal_S8_sf
PANTHERiPTHR11758 PTHR11758, 1 hit
PfamiView protein in Pfam
PF00410 Ribosomal_S8, 1 hit
SUPFAMiSSF56047 SSF56047, 1 hit
PROSITEiView protein in PROSITE
PS00053 RIBOSOMAL_S8, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P62246-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRMNVLADA LKSINNAEKR GKRQVLIRPC SKVIVRFLTV MMKHGYIGEF
60 70 80 90 100
EIIDDHRAGK IVVNLTGRLN KCGVISPRFD VQLKDLEKWQ NNLLPSRQFG
110 120 130
FIVLTTSAGI MDHEEARRKH TGGKILGFFF
Length:130
Mass (Da):14,840
Last modified:January 23, 2007 - v2
Checksum:iD4AC1E8864E3A184
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X77953 mRNA Translation: CAA54918.1
BC058452 mRNA Translation: AAH58452.1
PIRiJC2234
RefSeqiNP_446434.1, NM_053982.1
XP_006230159.1, XM_006230097.2
XP_006230160.1, XM_006230098.2
UniGeneiRn.2890

Genome annotation databases

EnsembliENSRNOT00000024678; ENSRNOP00000024678; ENSRNOG00000018320
ENSRNOT00000092282; ENSRNOP00000075906; ENSRNOG00000018320
ENSRNOT00000092513; ENSRNOP00000075747; ENSRNOG00000018320
GeneIDi117053
KEGGirno:117053
UCSCiRGD:619939 rat

Similar proteinsi

Entry informationi

Entry nameiRS15A_RAT
AccessioniPrimary (citable) accession number: P62246
Secondary accession number(s): P39027
, P39031, Q8C023, Q9BV24
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 5, 2004
Last sequence update: January 23, 2007
Last modified: May 23, 2018
This is version 106 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

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