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Protein

30S ribosomal protein S16

Gene

rpsP

Organism
Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S16UniRule annotation
Gene namesi
Name:rpsPUniRule annotation
Ordered Locus Names:LJ_1515
OrganismiLactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Taxonomic identifieri257314 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000000581 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001671961 – 9030S ribosomal protein S16Add BLAST90

Interactioni

Protein-protein interaction databases

STRINGi257314.LJ1515.

Structurei

3D structure databases

ProteinModelPortaliP62231.
SMRiP62231.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the bacterial ribosomal protein bS16 family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K5M. Bacteria.
COG0228. LUCA.
KOiK02959.
OMAiRARYWIG.

Family and domain databases

Gene3Di3.30.1320.10. 1 hit.
HAMAPiMF_00385. Ribosomal_S16. 1 hit.
InterProiView protein in InterPro
IPR000307. Ribosomal_S16.
IPR023803. Ribosomal_S16_dom.
PANTHERiPTHR12919. PTHR12919. 1 hit.
PfamiView protein in Pfam
PF00886. Ribosomal_S16. 1 hit.
SUPFAMiSSF54565. SSF54565. 1 hit.
TIGRFAMsiTIGR00002. S16. 1 hit.

Sequencei

Sequence statusi: Complete.

P62231-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVKIRMRRM GSKRKPFYRI VVADSRMPRD GRFIEEVGYY NPLTNPDEVK
60 70 80 90
LEEDKIFEWL EKGAQPSDTV RSLLSKAGLM TRYHDAKYGK
Length:90
Mass (Da):10,585
Last modified:July 5, 2004 - v1
Checksum:i0E103A53E22717A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE017198 Genomic DNA. Translation: AAS09283.1.
RefSeqiWP_003647505.1. NC_005362.1.

Genome annotation databases

EnsemblBacteriaiAAS09283; AAS09283; LJ_1515.
GeneIDi29638987.
KEGGiljo:LJ_1515.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS16_LACJO
AccessioniPrimary (citable) accession number: P62231
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 5, 2004
Last sequence update: July 5, 2004
Last modified: June 7, 2017
This is version 77 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families