Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

HTH-type transcriptional regulator GlnR

Gene

glnR

Organism
Bacillus anthracis
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Repressor for the glnRA operon. Binds specifically to the promoter region of the glnRA operon (By similarity).By similarity

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
DNA bindingi13 – 3220H-T-H motifPROSITE-ProRule annotationAdd
BLAST

GO - Molecular functioni

GO - Biological processi

  • glutamine biosynthetic process Source: TIGR
  • regulation of transcription, DNA-templated Source: TIGR
  • transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Repressor

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Enzyme and pathway databases

BioCyciANTHRA:GLNR-MONOMER.
BANT260799:GJAJ-3610-MONOMER.
BANT261594:GJ7F-3726-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
HTH-type transcriptional regulator GlnR
Gene namesi
Name:glnR
Ordered Locus Names:BA_3834, GBAA_3834, BAS3550
OrganismiBacillus anthracis
Taxonomic identifieri1392 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillusBacillus cereus group
Proteomesi
  • UP000000594 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 129129HTH-type transcriptional regulator GlnRPRO_0000098119Add
BLAST

Interactioni

Subunit structurei

Homodimer.By similarity

Protein-protein interaction databases

STRINGi198094.BA_3834.

Structurei

3D structure databases

ProteinModelPortaliP62172.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 7869HTH merR-typePROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 HTH merR-type DNA-binding domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiENOG4105KV4. Bacteria.
COG0789. LUCA.
HOGENOMiHOG000266082.
KOiK03713.
OMAiYEEQELV.
OrthoDBiEOG6H4KF1.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P62172-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEDRRSAPL FPIGIVMDLT QLSARQIRYY EEHNLVSPTR TKGNRRLFSF
60 70 80 90 100
NDVDKLLEIK DLLDQGLNMA GIKQVLLMKE NQTEAVKVKE ETKEISKTEL
110 120
RKILRDELQH TGRFNRTSLR QGDISRFFH
Length:129
Mass (Da):15,173
Last modified:June 21, 2004 - v1
Checksum:iBA363083892C6802
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016879 Genomic DNA. Translation: AAP27571.1.
AE017334 Genomic DNA. Translation: AAT32943.1.
AE017225 Genomic DNA. Translation: AAT55855.1.
RefSeqiNP_846085.1. NC_003997.3.
WP_000656783.1. NZ_LHUO01000006.1.
YP_029804.1. NC_005945.1.

Genome annotation databases

EnsemblBacteriaiAAP27571; AAP27571; BA_3834.
AAT32943; AAT32943; GBAA_3834.
AAT55855; AAT55855; BAS3550.
GeneIDi1084985.
23125415.
2848381.
KEGGiban:BA_3834.
bar:GBAA_3834.
bat:BAS3550.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016879 Genomic DNA. Translation: AAP27571.1.
AE017334 Genomic DNA. Translation: AAT32943.1.
AE017225 Genomic DNA. Translation: AAT55855.1.
RefSeqiNP_846085.1. NC_003997.3.
WP_000656783.1. NZ_LHUO01000006.1.
YP_029804.1. NC_005945.1.

3D structure databases

ProteinModelPortaliP62172.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi198094.BA_3834.

Protocols and materials databases

DNASUi1084985.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAP27571; AAP27571; BA_3834.
AAT32943; AAT32943; GBAA_3834.
AAT55855; AAT55855; BAS3550.
GeneIDi1084985.
23125415.
2848381.
KEGGiban:BA_3834.
bar:GBAA_3834.
bat:BAS3550.

Phylogenomic databases

eggNOGiENOG4105KV4. Bacteria.
COG0789. LUCA.
HOGENOMiHOG000266082.
KOiK03713.
OMAiYEEQELV.
OrthoDBiEOG6H4KF1.

Enzyme and pathway databases

BioCyciANTHRA:GLNR-MONOMER.
BANT260799:GJAJ-3610-MONOMER.
BANT261594:GJ7F-3726-MONOMER.

Family and domain databases

InterProiIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
[Graphical view]
PfamiPF13411. MerR_1. 1 hit.
[Graphical view]
SMARTiSM00422. HTH_MERR. 1 hit.
[Graphical view]
SUPFAMiSSF46955. SSF46955. 1 hit.
PROSITEiPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence of Bacillus anthracis Ames and comparison to closely related bacteria."
    Read T.D., Peterson S.N., Tourasse N.J., Baillie L.W., Paulsen I.T., Nelson K.E., Tettelin H., Fouts D.E., Eisen J.A., Gill S.R., Holtzapple E.K., Okstad O.A., Helgason E., Rilstone J., Wu M., Kolonay J.F., Beanan M.J., Dodson R.J.
    , Brinkac L.M., Gwinn M.L., DeBoy R.T., Madpu R., Daugherty S.C., Durkin A.S., Haft D.H., Nelson W.C., Peterson J.D., Pop M., Khouri H.M., Radune D., Benton J.L., Mahamoud Y., Jiang L., Hance I.R., Weidman J.F., Berry K.J., Plaut R.D., Wolf A.M., Watkins K.L., Nierman W.C., Hazen A., Cline R.T., Redmond C., Thwaite J.E., White O., Salzberg S.L., Thomason B., Friedlander A.M., Koehler T.M., Hanna P.C., Kolstoe A.-B., Fraser C.M.
    Nature 423:81-86(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ames / isolate Porton.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Ames ancestor.
  3. "Complete genome sequence of Bacillus anthracis Sterne."
    Brettin T.S., Bruce D., Challacombe J.F., Gilna P., Han C., Hill K., Hitchcock P., Jackson P., Keim P., Longmire J., Lucas S., Okinaka R., Richardson P., Rubin E., Tice H.
    Submitted (JAN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Sterne.

Entry informationi

Entry nameiGLNR_BACAN
AccessioniPrimary (citable) accession number: P62172
Secondary accession number(s): P19083, Q6HV34, Q6KPA8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 21, 2004
Last sequence update: June 21, 2004
Last modified: March 16, 2016
This is version 84 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.