P62084 (RS7_DANRE) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
40S ribosomal protein S7

Gene names

Name:	rps7
ORF Names:	zgc:73216

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) [Reference proteome]

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Actinopterygii › Actinopteri › Neopterygii › Teleostei › Elopocephala › Clupeocephala › Otocephala › Ostariophysi › Otophysi › Cypriniphysi › Cypriniformes › Cyprinoidea › Cyprinidae › Danio

Protein attributes

Sequence length	194 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein S7e family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	embryo development Inferred from mutant phenotype PubMed 21550419. Source: ZFIN hemopoiesis Inferred from mutant phenotype PubMed 21550419. Source: ZFIN rRNA processing Inferred from Biological aspect of Ancestor. Source: RefGenome regulation of cell cycle Inferred from mutant phenotype Ref.1. Source: ZFIN ribosomal small subunit biogenesis Inferred from Biological aspect of Ancestor. Source: RefGenome translation Inferred from electronic annotation. Source: InterPro
Cellular_component	90S preribosome Inferred from Biological aspect of Ancestor. Source: RefGenome cytosolic small ribosomal subunit Inferred from Biological aspect of Ancestor. Source: RefGenome small-subunit processome Inferred from Biological aspect of Ancestor. Source: RefGenome
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 194	194	40S ribosomal protein S7		PRO_0000174193

Sequences

	Sequence		Length	Mass (Da)
	P62084 [UniParc]. Last modified June 21, 2004. Version 1. Checksum: 5010023055B0BAD8	FASTA	194	22,250
	10 20 30 40 50 60 MFSTSAKIVK PNGEKPDEFE SGISQALLEL EMNSDLKAQL RELHITAAKE IEVGGSRKAI 70 80 90 100 110 120 IIFVPVPQLK SFQKIQVRLV RELEKKFSGK HVVFIAQRRI LPKPTRKSRT KNKQKRPRSR 130 140 150 160 170 180 TLTNVHDAIL EDLVFPSEIV GKRIRVKLDS SRLIKVHLDK AQQNNVEHKV ETFAGVYKKL 190 TGKDVIFEFP EFQL

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Many ribosomal protein genes are cancer genes in zebrafish." Amsterdam A., Sadler K.C., Lai K., Farrington S., Bronson R.T., Lees J.A., Hopkins N. PLoS Biol. 2:690-698(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]	The Danio rerio sequencing project at the Sanger Institute Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen.
[3]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (OCT-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Retina.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY561508 mRNA. Translation: AAS66961.1. BX276180 Genomic DNA. Translation: CAH68965.1. BC059562 mRNA. Translation: AAH59562.1.
IPI	IPI00513472.
RefSeq	NP_957046.1. NM_200752.1.
UniGene	Dr.28230.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7955.ENSDARP00000062435.
Proteomic databases
PRIDE	P62084.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000126229; ENSDARP00000109497; ENSDARG00000042566.
GeneID	393725.
KEGG	dre:393725.
Organism-specific databases
CTD	6201.
ZFIN	ZDB-GENE-040426-1718. rps7.
Phylogenomic databases
eggNOG	NOG280542.
GeneTree	ENSGT00390000014122.
HOGENOM	HOG000197237.
HOVERGEN	HBG001698.
InParanoid	P62084.
KO	K02993.
OMA	KFSDRHV.
OrthoDB	EOG4GQQ61.
Gene expression databases
Bgee	P62084.
Family and domain databases
InterPro	IPR000554. Ribosomal_S7e. [Graphical view]
PANTHER	PTHR11278. PTHR11278. 1 hit.
Pfam	PF01251. Ribosomal_S7e. 1 hit. [Graphical view]
PROSITE	PS00948. RIBOSOMAL_S7E. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	20814726.

Entry information

Entry name

RS7_DANRE

Accession

Primary (citable) accession number: P62084

Entry history

Integrated into UniProtKB/Swiss-Prot:	June 21, 2004
Last sequence update:	June 21, 2004
Last modified:	April 3, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program