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P61354 (RL27_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
60S ribosomal protein L27
Gene names
Name:Rpl27
OrganismRattus norvegicus (Rat) [Reference proteome]
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus

Protein attributes

Sequence length136 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L27e family.

Contains 1 KOW domain.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   PTMAcetylation
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular_componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 13613660S ribosomal protein L27
PRO_0000126079

Regions

Domain5 – 4036KOW

Amino acid modifications

Modified residue271N6-acetyllysine By similarity
Modified residue931N6-acetyllysine By similarity

Sequences

Sequence LengthMass (Da)Tools
P61354 [UniParc].

Last modified January 23, 2007. Version 2.
Checksum: 73F4151495029A32

FASTA13615,798
        10         20         30         40         50         60 
MGKFMKPGKV VLVLAGRYSG RKAVIVKNID DGTSDRPYSH ALVAGIDRYP RKVTAAMGKK 

        70         80         90        100        110        120 
KIAKRSKIKS FVKVYNYNHL MPTRYSVDIP LDKTVVNKDV FRDPALKRKA RREAKVKFEE 

       130 
RYKTGKNKWF FQKLRF 

« Hide

References

« Hide 'large scale' references
[1]"Nucleotide sequence of cloned cDNA specific for rat ribosomal protein L27."
Tanaka T., Kuwano Y., Ishikawa K., Ogata K.
Eur. J. Biochem. 173:53-56(1988) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: Wistar.
Tissue: Liver.
[2]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Pituitary and Thymus.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
X07424 mRNA. Translation: CAA30313.1.
BC058474 mRNA. Translation: AAH58474.1.
BC091566 mRNA. Translation: AAH91566.1.
PIRR5RT27. S00401.
RefSeqNP_071959.1. NM_022514.1.
UniGeneRn.1254.

3D structure databases

ProteinModelPortalP61354.
SMRP61354. Positions 2-136.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid249021. 3 interactions.
IntActP61354. 1 interaction.
MINTMINT-4578026.
STRING10116.ENSRNOP00000028060.

Proteomic databases

PaxDbP61354.
PRIDEP61354.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSRNOT00000028060; ENSRNOP00000028060; ENSRNOG00000020674.
GeneID64306.
KEGGrno:64306.
UCSCRGD:621192. rat.

Organism-specific databases

CTD6155.
RGD621192. Rpl27.

Phylogenomic databases

eggNOGCOG2163.
GeneTreeENSGT00390000010721.
HOGENOMHOG000210138.
HOVERGENHBG050005.
InParanoidP61354.
KOK02901.
OMAKIYKPGK.
OrthoDBEOG7J181Z.
PhylomeDBP61354.
TreeFamTF314648.

Gene expression databases

GenevestigatorP61354.

Family and domain databases

Gene3D2.30.30.30. 1 hit.
InterProIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERPTHR10497. PTHR10497. 1 hit.
PfamPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMSSF50104. SSF50104. 1 hit.
PROSITEPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio612950.
PROP61354.

Entry information

Entry nameRL27_RAT
AccessionPrimary (citable) accession number: P61354
Secondary accession number(s): P08526, Q5BJ97
Entry history
Integrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries