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P61354

- RL27_RAT

UniProt

P61354 - RL27_RAT

Protein

60S ribosomal protein L27

Gene

Rpl27

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    60S ribosomal protein L27
    Gene namesi
    Name:Rpl27
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 10

    Organism-specific databases

    RGDi621192. Rpl27.

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 13613660S ribosomal protein L27PRO_0000126079Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei27 – 271N6-acetyllysineBy similarity
    Modified residuei93 – 931N6-acetyllysineBy similarity

    Keywords - PTMi

    Acetylation

    Proteomic databases

    PaxDbiP61354.
    PRIDEiP61354.

    Expressioni

    Gene expression databases

    GenevestigatoriP61354.

    Interactioni

    Protein-protein interaction databases

    BioGridi249021. 3 interactions.
    IntActiP61354. 1 interaction.
    MINTiMINT-4578026.
    STRINGi10116.ENSRNOP00000028060.

    Structurei

    3D structure databases

    ProteinModelPortaliP61354.
    SMRiP61354. Positions 2-136.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini5 – 4036KOWAdd
    BLAST

    Sequence similaritiesi

    Belongs to the ribosomal protein L27e family.Curated
    Contains 1 KOW domain.Curated

    Phylogenomic databases

    eggNOGiCOG2163.
    GeneTreeiENSGT00390000010721.
    HOGENOMiHOG000210138.
    HOVERGENiHBG050005.
    InParanoidiP61354.
    KOiK02901.
    OMAiKIYKPGK.
    OrthoDBiEOG7J181Z.
    PhylomeDBiP61354.
    TreeFamiTF314648.

    Family and domain databases

    Gene3Di2.30.30.30. 1 hit.
    InterProiIPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR001141. Ribosomal_L27e.
    IPR018262. Ribosomal_L27e_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view]
    PANTHERiPTHR10497. PTHR10497. 1 hit.
    PfamiPF00467. KOW. 1 hit.
    PF01777. Ribosomal_L27e. 1 hit.
    [Graphical view]
    ProDomiPD009396. Ribosomal_L27e. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SMARTiSM00739. KOW. 1 hit.
    [Graphical view]
    SUPFAMiSSF50104. SSF50104. 1 hit.
    PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P61354-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGKFMKPGKV VLVLAGRYSG RKAVIVKNID DGTSDRPYSH ALVAGIDRYP    50
    RKVTAAMGKK KIAKRSKIKS FVKVYNYNHL MPTRYSVDIP LDKTVVNKDV 100
    FRDPALKRKA RREAKVKFEE RYKTGKNKWF FQKLRF 136
    Length:136
    Mass (Da):15,798
    Last modified:January 23, 2007 - v2
    Checksum:i73F4151495029A32
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X07424 mRNA. Translation: CAA30313.1.
    BC058474 mRNA. Translation: AAH58474.1.
    BC091566 mRNA. Translation: AAH91566.1.
    PIRiS00401. R5RT27.
    RefSeqiNP_071959.1. NM_022514.1.
    UniGeneiRn.1254.

    Genome annotation databases

    EnsembliENSRNOT00000028060; ENSRNOP00000028060; ENSRNOG00000020674.
    GeneIDi64306.
    KEGGirno:64306.
    UCSCiRGD:621192. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    X07424 mRNA. Translation: CAA30313.1 .
    BC058474 mRNA. Translation: AAH58474.1 .
    BC091566 mRNA. Translation: AAH91566.1 .
    PIRi S00401. R5RT27.
    RefSeqi NP_071959.1. NM_022514.1.
    UniGenei Rn.1254.

    3D structure databases

    ProteinModelPortali P61354.
    SMRi P61354. Positions 2-136.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 249021. 3 interactions.
    IntActi P61354. 1 interaction.
    MINTi MINT-4578026.
    STRINGi 10116.ENSRNOP00000028060.

    Proteomic databases

    PaxDbi P61354.
    PRIDEi P61354.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000028060 ; ENSRNOP00000028060 ; ENSRNOG00000020674 .
    GeneIDi 64306.
    KEGGi rno:64306.
    UCSCi RGD:621192. rat.

    Organism-specific databases

    CTDi 6155.
    RGDi 621192. Rpl27.

    Phylogenomic databases

    eggNOGi COG2163.
    GeneTreei ENSGT00390000010721.
    HOGENOMi HOG000210138.
    HOVERGENi HBG050005.
    InParanoidi P61354.
    KOi K02901.
    OMAi KIYKPGK.
    OrthoDBi EOG7J181Z.
    PhylomeDBi P61354.
    TreeFami TF314648.

    Miscellaneous databases

    NextBioi 612950.
    PROi P61354.

    Gene expression databases

    Genevestigatori P61354.

    Family and domain databases

    Gene3Di 2.30.30.30. 1 hit.
    InterProi IPR005824. KOW.
    IPR014722. Rib_L2_dom2.
    IPR001141. Ribosomal_L27e.
    IPR018262. Ribosomal_L27e_CS.
    IPR008991. Translation_prot_SH3-like.
    [Graphical view ]
    PANTHERi PTHR10497. PTHR10497. 1 hit.
    Pfami PF00467. KOW. 1 hit.
    PF01777. Ribosomal_L27e. 1 hit.
    [Graphical view ]
    ProDomi PD009396. Ribosomal_L27e. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SMARTi SM00739. KOW. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50104. SSF50104. 1 hit.
    PROSITEi PS01107. RIBOSOMAL_L27E. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Nucleotide sequence of cloned cDNA specific for rat ribosomal protein L27."
      Tanaka T., Kuwano Y., Ishikawa K., Ogata K.
      Eur. J. Biochem. 173:53-56(1988) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
      Strain: Wistar.
      Tissue: Liver.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Pituitary and Thymus.

    Entry informationi

    Entry nameiRL27_RAT
    AccessioniPrimary (citable) accession number: P61354
    Secondary accession number(s): P08526, Q5BJ97
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: August 1, 1988
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 74 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Ribosomal proteins
      Ribosomal proteins families and list of entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3