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P61354

- RL27_RAT

UniProt

P61354 - RL27_RAT

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Protein

60S ribosomal protein L27

Gene
Rpl27
Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
60S ribosomal protein L27
Gene namesi
Name:Rpl27
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 10

Organism-specific databases

RGDi621192. Rpl27.

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13613660S ribosomal protein L27PRO_0000126079Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei27 – 271N6-acetyllysine By similarity
Modified residuei93 – 931N6-acetyllysine By similarity

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiP61354.
PRIDEiP61354.

Expressioni

Gene expression databases

GenevestigatoriP61354.

Interactioni

Protein-protein interaction databases

BioGridi249021. 3 interactions.
IntActiP61354. 1 interaction.
MINTiMINT-4578026.
STRINGi10116.ENSRNOP00000028060.

Structurei

3D structure databases

ProteinModelPortaliP61354.
SMRiP61354. Positions 2-136.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini5 – 4036KOWAdd
BLAST

Sequence similaritiesi

Contains 1 KOW domain.

Phylogenomic databases

eggNOGiCOG2163.
GeneTreeiENSGT00390000010721.
HOGENOMiHOG000210138.
HOVERGENiHBG050005.
InParanoidiP61354.
KOiK02901.
OMAiKIYKPGK.
OrthoDBiEOG7J181Z.
PhylomeDBiP61354.
TreeFamiTF314648.

Family and domain databases

Gene3Di2.30.30.30. 1 hit.
InterProiIPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
PANTHERiPTHR10497. PTHR10497. 1 hit.
PfamiPF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view]
ProDomiPD009396. Ribosomal_L27e. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTiSM00739. KOW. 1 hit.
[Graphical view]
SUPFAMiSSF50104. SSF50104. 1 hit.
PROSITEiPS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P61354-1 [UniParc]FASTAAdd to Basket

« Hide

MGKFMKPGKV VLVLAGRYSG RKAVIVKNID DGTSDRPYSH ALVAGIDRYP    50
RKVTAAMGKK KIAKRSKIKS FVKVYNYNHL MPTRYSVDIP LDKTVVNKDV 100
FRDPALKRKA RREAKVKFEE RYKTGKNKWF FQKLRF 136
Length:136
Mass (Da):15,798
Last modified:January 23, 2007 - v2
Checksum:i73F4151495029A32
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X07424 mRNA. Translation: CAA30313.1.
BC058474 mRNA. Translation: AAH58474.1.
BC091566 mRNA. Translation: AAH91566.1.
PIRiS00401. R5RT27.
RefSeqiNP_071959.1. NM_022514.1.
UniGeneiRn.1254.

Genome annotation databases

EnsembliENSRNOT00000028060; ENSRNOP00000028060; ENSRNOG00000020674.
GeneIDi64306.
KEGGirno:64306.
UCSCiRGD:621192. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
X07424 mRNA. Translation: CAA30313.1 .
BC058474 mRNA. Translation: AAH58474.1 .
BC091566 mRNA. Translation: AAH91566.1 .
PIRi S00401. R5RT27.
RefSeqi NP_071959.1. NM_022514.1.
UniGenei Rn.1254.

3D structure databases

ProteinModelPortali P61354.
SMRi P61354. Positions 2-136.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 249021. 3 interactions.
IntActi P61354. 1 interaction.
MINTi MINT-4578026.
STRINGi 10116.ENSRNOP00000028060.

Proteomic databases

PaxDbi P61354.
PRIDEi P61354.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000028060 ; ENSRNOP00000028060 ; ENSRNOG00000020674 .
GeneIDi 64306.
KEGGi rno:64306.
UCSCi RGD:621192. rat.

Organism-specific databases

CTDi 6155.
RGDi 621192. Rpl27.

Phylogenomic databases

eggNOGi COG2163.
GeneTreei ENSGT00390000010721.
HOGENOMi HOG000210138.
HOVERGENi HBG050005.
InParanoidi P61354.
KOi K02901.
OMAi KIYKPGK.
OrthoDBi EOG7J181Z.
PhylomeDBi P61354.
TreeFami TF314648.

Miscellaneous databases

NextBioi 612950.
PROi P61354.

Gene expression databases

Genevestigatori P61354.

Family and domain databases

Gene3Di 2.30.30.30. 1 hit.
InterProi IPR005824. KOW.
IPR014722. Rib_L2_dom2.
IPR001141. Ribosomal_L27e.
IPR018262. Ribosomal_L27e_CS.
IPR008991. Translation_prot_SH3-like.
[Graphical view ]
PANTHERi PTHR10497. PTHR10497. 1 hit.
Pfami PF00467. KOW. 1 hit.
PF01777. Ribosomal_L27e. 1 hit.
[Graphical view ]
ProDomi PD009396. Ribosomal_L27e. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
SMARTi SM00739. KOW. 1 hit.
[Graphical view ]
SUPFAMi SSF50104. SSF50104. 1 hit.
PROSITEi PS01107. RIBOSOMAL_L27E. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Nucleotide sequence of cloned cDNA specific for rat ribosomal protein L27."
    Tanaka T., Kuwano Y., Ishikawa K., Ogata K.
    Eur. J. Biochem. 173:53-56(1988) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    Strain: Wistar.
    Tissue: Liver.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Pituitary and Thymus.

Entry informationi

Entry nameiRL27_RAT
AccessioniPrimary (citable) accession number: P61354
Secondary accession number(s): P08526, Q5BJ97
Entry historyi
Integrated into UniProtKB/Swiss-Prot: August 1, 1988
Last sequence update: January 23, 2007
Last modified: April 16, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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