P61354 (RL27_RAT) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
60S ribosomal protein L27

Gene names

Name:

Rpl27

Organism

Rattus norvegicus (Rat) [Reference proteome]

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	136 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L27e family. Contains 1 KOW domain.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
PTM	Acetylation
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: InterPro
Cellular_component	cytosolic large ribosomal subunit Inferred from electronic annotation. Source: Compara
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 136	136	60S ribosomal protein L27		PRO_0000126079
Regions
	Domain	5 – 40	36	KOW
Amino acid modifications
	Modified residue	27	1	N6-acetyllysine By similarity
	Modified residue	93	1	N6-acetyllysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	P61354 [UniParc]. Last modified January 23, 2007. Version 2. Checksum: 73F4151495029A32	FASTA	136	15,798
	10 20 30 40 50 60 MGKFMKPGKV VLVLAGRYSG RKAVIVKNID DGTSDRPYSH ALVAGIDRYP RKVTAAMGKK 70 80 90 100 110 120 KIAKRSKIKS FVKVYNYNHL MPTRYSVDIP LDKTVVNKDV FRDPALKRKA RREAKVKFEE 130 RYKTGKNKWF FQKLRF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Nucleotide sequence of cloned cDNA specific for rat ribosomal protein L27." Tanaka T., Kuwano Y., Ishikawa K., Ogata K. Eur. J. Biochem. 173:53-56(1988) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA]. Strain: Wistar. Tissue: Liver.
[2]	"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Pituitary and Thymus.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X07424 mRNA. Translation: CAA30313.1. BC058474 mRNA. Translation: AAH58474.1. BC091566 mRNA. Translation: AAH91566.1.
IPI	IPI00231360.
PIR	R5RT27. S00401.
RefSeq	NP_071959.1. NM_022514.1.
UniGene	Rn.1254.
3D structure databases
ProteinModelPortal	P61354.
ModBase	Search...
Protein-protein interaction databases
IntAct	P61354. 1 interaction.
MINT	MINT-4578026.
STRING	10116.ENSRNOP00000028060.
Proteomic databases
PaxDb	P61354.
PRIDE	P61354.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSRNOT00000028060; ENSRNOP00000028060; ENSRNOG00000020674.
GeneID	64306.
KEGG	rno:64306.
UCSC	RGD:621192. rat.
Organism-specific databases
CTD	6155.
RGD	621192. Rpl27.
Phylogenomic databases
eggNOG	COG2163.
GeneTree	ENSGT00390000010721.
HOGENOM	HOG000210138.
HOVERGEN	HBG050005.
InParanoid	P61354.
KO	K02901.
OMA	FNYNHLM.
OrthoDB	EOG48SGVG.
Gene expression databases
Genevestigator	P61354.
GermOnline	ENSRNOG00000020674. Rattus norvegicus.
Family and domain databases
Gene3D	2.30.30.30. 1 hit.
InterPro	IPR005824. KOW. IPR014722. Rib_L2_dom2. IPR001141. Ribosomal_L27e. IPR018262. Ribosomal_L27e_CS. [Graphical view]
PANTHER	PTHR10497. PTHR10497. 1 hit.
Pfam	PF00467. KOW. 1 hit. PF01777. Ribosomal_L27e. 1 hit. [Graphical view]
ProDom	PD009396. Ribosomal_L27e. 1 hit. [Graphical view] [Entries sharing at least one domain]
SMART	SM00739. KOW. 1 hit. [Graphical view]
PROSITE	PS01107. RIBOSOMAL_L27E. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	612950.

Entry information

Entry name

RL27_RAT

Accession

Primary (citable) accession number: P61354
Secondary accession number(s): P08526, Q5BJ97

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 1, 1988
Last sequence update:	January 23, 2007
Last modified:	May 29, 2013
This is version 65 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program