P61073 (CXCR4_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
May 1, 2013.
Version 111.
History...
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Interactions·Alt products·Sequence annotation·Sequences·References·Web links·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: C-X-C chemokine receptor type 4 Short name=CXC-R4 Short name=CXCR-4 Alternative name(s): FB22 Fusin HM89 LCR1 Leukocyte-derived seven transmembrane domain receptor Short name=LESTR NPYRL Stromal cell-derived factor 1 receptor Short name=SDF-1 receptor CD_antigen=CD184 | ||
| Gene names |
| ||
| Organism | Homo sapiens (Human) [Reference proteome] | ||
| Taxonomic identifier | 9606 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo![]() |
Protein attributes
| Sequence length | 352 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Receptor for the C-X-C chemokine CXCL12/SDF-1 that transduces a signal by increasing intracellular calcium ion levels and enhancing MAPK1/MAPK3 activation. Acts as a receptor for extracellular ubiquitin; leading to enhanced intracellular calcium ions and reduced cellular cAMP levels. Involved in hematopoiesis and in cardiac ventricular septum formation. Also plays an essential role in vascularization of the gastrointestinal tract, probably by regulating vascular branching and/or remodeling processes in endothelial cells. Involved in cerebellar development. In the CNS, could mediate hippocampal-neuron survival. Acts as a coreceptor (CD4 being the primary receptor) for HIV-1 X4 isolates and as a primary receptor for some HIV-2 isolates. Promotes Env-mediated fusion of the virus. Ref.1 Ref.2 Ref.6 Ref.20 Ref.21 Ref.27 Ref.29 Ref.30 Ref.38 Ref.43 Ref.44 Ref.45 |
| Subunit structure | Monomer. Can form dimers. Interacts with CD164. Interacts with HIV-1 surface protein gp120 and Tat. Interacts with ARRB2; the interaction is dependent on the C-terminal phosphorylation of CXCR4 and allows activation of MAPK1 and MAPK3. Interacts with ARRC; the interaction is dependent on the C-terminal phosphorylation of CXCR4 and modulates calcium mobilization. Interacts (via the cytoplasmic C-terminal) with ITCH (via the WW domains I and II); the interaction, enhanced by CXCL12, ubiquitinates CXCR4 and leads to its degradation. Interacts with extracellular ubiquitin. Interacts with human cytomegalovirus/HHV-5 protein UL78. Ref.25 Ref.28 Ref.29 Ref.30 Ref.31 Ref.32 Ref.33 Ref.37 Ref.39 Ref.42 Ref.43 Ref.44 Ref.45 Ref.47 Ref.48 Ref.50 |
| Subcellular location | Cell membrane; Multi-pass membrane protein. Note: In unstimulated cells, diffuse pattern on plasma membrane. On agonist stimulation, colocalizes with ITCH at the plasma membrane where it becomes ubiquitinated. Ref.34 Ref.42 |
| Tissue specificity | Expressed in numerous tissues, such as peripheral blood leukocytes, spleen, thymus, spinal cord, heart, placenta, lung, liver, skeletal muscle, kidney, pancreas, cerebellum, cerebral cortex and medulla (in microglia as well as in astrocytes), brain microvascular, coronary artery and umbilical cord endothelial cells. Isoform 1 is predominant in all tissues tested. |
| Domain | The amino-terminus is critical for ligand binding. Residues in all four extracellular regions contribute to HIV-1 coreceptor activity. Ref.28 |
| Post-translational modification | Phosphorylated on agonist stimulation. Rapidly phosphorylated on serine and threonine residues in the C-terminal. Phosphorylation at Ser-324 and Ser-325 leads to recruitment of ITCH, ubiquitination and protein degradation. Ref.42 Ref.43 Ubiquitinated by ITCH at the cell membrane on agonist stimulation. The ubiquitin-dependent mechanism, endosomal sorting complex required for transport (ESCRT), then targets CXCR4 for lysosomal degradation. This process is dependent also on prior Ser-/Thr-phosphorylation in the C-terminal of CXCR4. Also binding of ARRB1 to STAM negatively regulates CXCR4 sorting to lysosomes though modulating ubiquitination of SFR5S. Ref.34 Sulfation on Tyr-21 is required for efficient binding of CXCL12/SDF-1alpha and promotes its dimerization. Tyr-7 and Tyr-12 are sulfated in a sequential manner after Tyr-21 is almost fully sulfated, with the binding affinity for CXCL12/SDF-1alpha increasing with the number of sulfotyrosines present. Sulfotyrosines Tyr-7 and Tyr-12 occupy clefts on opposing CXCL12 subunits, thus bridging the CXCL12 dimer interface and promoting CXCL12 dimerization. O- and N-glycosylated. Asn-11 is the principal site of N-glycosylation. There appears to be very little or no glycosylation on Asn-176. N-glycosylation masks coreceptor function in both X4 and R5 laboratory-adapted and primary HIV-1 strains through inhibiting interaction with their Env glycoproteins. The O-glycosylation chondroitin sulfate attachment does not affect interaction with CXCL12/SDF-1alpha nor its coreceptor activity. Ref.31 Ref.33 |
| Involvement in disease | WHIM syndrome (WHIM) [MIM:193670]: Immunodeficiency disease characterized by neutropenia, hypogammaglobulinemia and extensive human papillomavirus (HPV) infection. Despite the peripheral neutropenia, bone marrow aspirates from affected individuals contain abundant mature myeloid cells, a condition termed myelokathexis. |
| Miscellaneous | Plerixafor (AMD3100), an antagonist of CXCR4 activity, blocks HIV-1 entry, interaction with CXCL12 and subsequent CXCR4 signaling. |
| Sequence similarities | Belongs to the G-protein coupled receptor 1 family. |
| Caution | Was originally (Ref.1 and Ref.2) thought to be a receptor for neuropeptide Y type 3 (NPY3R) (NPY3-R). |
| Sequence caution | The sequence CAA12166.1 differs from that shown. Reason: Intron retention. |
Ontologies
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| MYH9 | P35579 | 5 | EBI-489411,EBI-350338 |
Alternative products
| This entry describes 2 isoforms produced by alternative splicing. [Align] [Select] Note: Additional isoforms seem to exist. | ||||||
| Isoform 1 (identifier: P61073-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P61073-2) Also known as: CXCR4-LO; The sequence of this isoform differs from the canonical sequence as follows: 1-5: MEGIS → MSIPLPLLQ |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | |||||||||||||||||||||||||||||||||||||||||||||||
Molecule processing | ||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 352 | 352 | C-X-C chemokine receptor type 4 | PRO_0000069352 | ||||||||||||||||||||||||||||||||||||||||||||||||
Regions | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 1 – 38 | 38 | Extracellular | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 39 – 63 | 25 | Helical; Name=1 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 64 – 77 | 14 | Cytoplasmic | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 78 – 99 | 22 | Helical; Name=2 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 100 – 110 | 11 | Extracellular | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 111 – 130 | 20 | Helical; Name=3 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 131 – 154 | 24 | Cytoplasmic | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 155 – 174 | 20 | Helical; Name=4 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 175 – 195 | 21 | Extracellular | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 196 – 216 | 21 | Helical; Name=5 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 217 – 241 | 25 | Cytoplasmic | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 242 – 261 | 20 | Helical; Name=6 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 262 – 282 | 21 | Extracellular | |||||||||||||||||||||||||||||||||||||||||||||||||
| Transmembrane | 283 – 302 | 20 | Helical; Name=7 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Topological domain | 303 – 352 | 50 | Cytoplasmic | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 1 – 21 | 21 | Important for chemokine binding, signaling and HIV-1 coreceptor activity | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 94 – 97 | 4 | Chemokine binding | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 113 – 117 | 5 | Chemokine binding | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 135 – 147 | 13 | Involved in dimerization; when bound to chemokine | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 186 – 190 | 5 | Chemokine binding, important for signaling and HIV-1 coreceptor activity | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 191 – 210 | 20 | Involved in dimerization | |||||||||||||||||||||||||||||||||||||||||||||||||
| Region | 266 – 268 | 3 | Involved in dimerization | |||||||||||||||||||||||||||||||||||||||||||||||||
| Motif | 133 – 135 | 3 | Important for signaling | |||||||||||||||||||||||||||||||||||||||||||||||||
Sites | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Binding site | 171 | 1 | Chemokine | |||||||||||||||||||||||||||||||||||||||||||||||||
| Binding site | 288 | 1 | Chemokine | |||||||||||||||||||||||||||||||||||||||||||||||||
Amino acid modifications | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 7 | 1 | Sulfotyrosine; partial Ref.39 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 12 | 1 | Sulfotyrosine; partial Ref.39 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 21 | 1 | Sulfotyrosine Ref.33 Ref.39 Ref.48 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 319 | 1 | Phosphoserine Ref.41 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 321 | 1 | Phosphoserine Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 324 | 1 | Phosphoserine; by PKC and GRK6 Ref.42 Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 325 | 1 | Phosphoserine; by PKC and GRK6 Ref.42 Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 330 | 1 | Phosphoserine; by GRK6 Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 339 | 1 | Phosphoserine; by GRK6 Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 348 | 1 | Phosphoserine Ref.41 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Modified residue | 351 | 1 | Phosphoserine Ref.43 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Glycosylation | 11 | 1 | N-linked (GlcNAc...) Ref.31 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Glycosylation | 18 | 1 | O-linked (Xyl...) (chondroitin sulfate) Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Glycosylation | 176 | 1 | N-linked (GlcNAc...) Potential | |||||||||||||||||||||||||||||||||||||||||||||||||
| Disulfide bond | 28 ↔ 274 | Ref.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Disulfide bond | 109 ↔ 186 | Ref.50 | ||||||||||||||||||||||||||||||||||||||||||||||||||
Natural variations | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Alternative sequence | 1 – 5 | 5 | MEGIS → MSIPLPLLQ in isoform 2. | VSP_001890 | ||||||||||||||||||||||||||||||||||||||||||||||||
Experimental info | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 2 – 9 | 8 | Missing: Reduced CXCL12 binding. Abolishes signaling. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 4 – 20 | 17 | Missing: Reduced CXCL12 binding. Impaired signaling. Reduced coreceptor activity for HIV-1 isolates LAI and NDK. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 7 | 1 | Y → A: Reduced coreceptor activity for HIV-1 isolates LAI and NDK. Greatly reduced coreceptor activity for HIV-1 isolates LAI and NDK; when associated with A-12. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 7 | 1 | Y → F: Sulfate incorporation greatly reduced; when associated with F-12 and F-21. Moderate reduction in sulfate incorporation; when associated with F-12 and A-18. No sulfate incorporation and binding SDF-1alpha greatly reduced; when associated with F-12; A-18 and F-21. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 8 | 1 | T → A: No effect on sulfate incorporation; when associated with A-9 and A-13. Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 9 | 1 | S → A: No effect on sulfate incorporation; when associated with A-8 and A-13. Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 10 – 20 | 11 | Missing: Reduced CXCL12 binding. No effect on signaling. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 11 | 1 | N → A: Reduced molecular weight. Enhanced coreceptor activity on R5 HIV-1 isolate Envs. Slight further enhancement of coreceptor activity; when associated with A-13. Ref.31 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 12 | 1 | Y → A: Greatly reduced coreceptor activity for HIV-1 isolates LAI and NDK; when associated with A-7. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 12 | 1 | Y → F: Sulfate incorporation greatly reduced; when associated with F-7 and F-21. Moderate reduction in sulfate incorporation; when associated with F-7 and A-18. No sulfate incorporation and binding SDF-1alpha greatly reduced; when associated with F-7; A-18 and F-21. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 13 | 1 | T → A: Enhanced coreceptor activity on R5 HIV-1 isolate Envs. No effect on sulfate incorporation; when associated with A-8 and A-9. Ref.31 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 14 – 15 | 2 | EE → AA: Reduced CXCL12 binding. Reduced coreceptor activity for HIV-1 isolate NDK. | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 18 | 1 | S → A: Sulfate incorporation greatly reduced; when associated with F-21. Moderate reduction in sulfate incorporation; when associated with F-7 and F-12. No sulfate incorporation and binding SDF-1alpha greatly reduced; when associated with F-7; F-12; and F-21. Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 21 | 1 | Y → A: Reduced CXCL12 binding. Reduced coreceptor activity for HIV-1 isolates LAI and NDk. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 21 | 1 | Y → F: Sulfate incorporation greatly reduced; when associated with F-7 and F-12. Sulfate incorporation greatly reduced; when associated with A-18. No sulfate incorporation and binding SDF-1alpha greatly reduced; when associated with F-7; F-12 and A-18. Ref.30 Ref.33 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 97 | 1 | D → N: Reduced CXCL12 binding. Abolishes signaling. Markedly reduced coreceptor activity for HIV-1 isolate LAI. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 119 | 1 | N → D: No reduction of agonist-induced G-protein activation. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 119 | 1 | N → K: Loss of agonist-induced G-protein activation. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 119 | 1 | N → S: Constitutive G-protein activation, with further activation induced by agonist. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 125 | 1 | L → W: Increased thermostability. | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 133 | 1 | D → N: No reduction of agonist-induced G-protein activation. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 134 | 1 | R → A: Loss of agonist-induced G-protein activation. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 135 | 1 | Y → A: No reduction of agonist-induced G-protein activation. Ref.38 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 171 | 1 | D → N: Reduced coreceptor activity for HIV-1 isolate NDK. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 176 | 1 | N → A: Enhanced coreceptor activity on R5 HIV-1 isolate Envs; when associated with A-11. Ref.31 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 183 | 1 | R → A: Reduced coreceptor activity for several HIV-1 isolates. Ref.27 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 187 | 1 | D → A: Reduced CXCL12 binding. Abolishes signaling. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 188 | 1 | R → A: Reduced coreceptor activity for several HIV-1 isolates. Ref.27 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 193 | 1 | D → A, S or N: Greatly reduced coreceptor activity for HIV-1 isolate NDK. Reduced coreceptor activity for several other HIV-1 isolates. Ref.27 Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 193 | 1 | D → R: Abolishes coreceptor activity for HIV-1 isolate NDK. Reduced coreceptor activity for several other HIV-1 isolates. Ref.27 Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 240 | 1 | T → P: Retains ligand-binding affinity but abolishes signaling. | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 262 | 1 | D → A: Markedly reduced coreceptor activity for HIV-1 isolate LAI. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 268 | 1 | E → A: Markedly reduced coreceptor activity for HIV-1 isolate NDK. Less effect for HIV-1 isolate LAI. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 288 | 1 | E → Q: Reduced CXCL12 binding. Impaired signaling. Reduced coreceptor activity for HIV-1 isolate LAI. Enhanced coreceptor activity for HIV-1 isolate NDK. Ref.30 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 324 | 1 | S → A: Moderate degradation. About 60% reduction in binding ITCH and no ubiquitination nor protein degradation; when associated with A-325. Ref.42 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 324 | 1 | S → D: Enhanced binding to ITCH. Enhanced binding to ITCH and greatly increased protein degradation; when associated with D-324. Ref.42 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 324 | 1 | S → D: Enhanced binding to ITCH. Enhanced binding to ITCH and greatly increased protein degradation; when associated with D-325. | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 325 | 1 | S → A: Moderate degradation. About 60% reduction in binding ITCH and no ubiquitination nor protein degradation; when associated with A-324. Ref.42 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Mutagenesis | 330 | 1 | S → A: No effect on binding to ITCH. Ref.42 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 242 – 244 | 3 | VIL → IIP in AAK29630. Ref.12 | |||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence conflict | 278 | 1 | N → S in BAG35177. Ref.13 | |||||||||||||||||||||||||||||||||||||||||||||||||
Secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Helix Strand Turn | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 9 – 11 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 21 – 23 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 32 – 35 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 37 – 62 | 26 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 63 – 66 | 4 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 67 – 69 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 72 – 88 | 17 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 91 – 99 | 9 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 105 – 139 | 35 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 141 – 143 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 145 – 153 | 9 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 155 – 159 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 161 – 166 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 169 – 174 | 6 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 175 – 179 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Beta strand | 181 – 188 | 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 193 – 207 | 15 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 209 – 225 | 17 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 226 – 228 | 3 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 231 – 266 | 36 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 274 – 291 | 18 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 294 – 301 | 8 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Turn | 302 – 306 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Helix | 313 – 317 | 5 | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Molecular cloning, characterization, and localization of the human homolog to the reported bovine NPY Y3 receptor: lack of NPY binding and activation." Herzog H., Hort Y.J., Shine J., Selbie L.A. DNA Cell Biol. 12:465-471(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), PRELIMINARY FUNCTION. Tissue: Lung. |
| [2] | "A proposed bovine neuropeptide Y (NPY) receptor cDNA clone, or its human homologue, confers neither NPY binding sites nor NPY responsiveness on transfected cells." Jazin E.E., Yoo H., Blomqvist A.G., Yee F., Weng G., Walker M.W., Salon J., Larhammar D., Wahlestedt C.R. Regul. Pept. 47:247-258(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), PRELIMINARY FUNCTION. Tissue: Fetal brain. |
| [3] | "Molecular cloning of the cDNA and chromosomal localization of the gene for a putative seven-transmembrane segment (7-TMS) receptor isolated from human spleen." Federsppiel B., Melhado I.G., Duncan A.M.V., Delaney A.D., Schappert K., Clark-Lewis I., Jirik F.R. Genomics 16:707-712(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Fetal spleen. |
| [4] | "Cloning of a human seven-transmembrane domain receptor, LESTR, that is highly expressed in leukocytes." Loetscher M., Geiser T., O'Reilly T., Zwahlen R., Baggiolini M., Moser B. J. Biol. Chem. 269:232-237(1994) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). Tissue: Monocyte. |
| [5] | "Molecular cloning of cDNAs encoding a LD78 receptor and putative leukocyte chemotactic peptide receptors." Nomura H., Nielsen B.W., Matsushima K. Int. Immunol. 5:1239-1249(1993) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [6] | "HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor." Feng Y., Broder C.C., Kennedy P.E., Berger E.A. Science 272:872-877(1996) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1), CHARACTERIZATION OF ITS HIV-1 CORECEPTOR FUNCTION. |
| [7] | "Genomic organization and functional characterization of the chemokine receptor CXCR4, a major entry co-receptor for human immunodeficiency virus type 1." Wegner S.A., Ehrenberg P.K., Chang G., Dayhoff D.E., Sleeker A.L., Michael N.L. J. Biol. Chem. 273:4754-4760(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Tissue: Peripheral blood leukocyte. |
| [8] | "Genomic organization and promoter characterization of human CXCR4 gene." Caruz A., Samsom M., Alonso J.M., Alcami J., Baleux F., Virelizier J.-L., Parmentier M., Arenzana-Seisdedos F. FEBS Lett. 426:271-278(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [9] | "Partial resistance to infection by R5X4 primary HIV type 1 isolates in an exposed-uninfected individual homozygous for CCR5 32-base pair deletion." Xiao L., Weiss S.H., Qari S.H., Rudolph D., Zhao C., Denny T.N., Hodge T., Lal R.B. AIDS Res. Hum. Retroviruses 15:1201-1208(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [10] | "Genomic organization and expression of the CXCR4 gene in mouse and man: absence of a splice variant corresponding to mouse CXCR4-B in human tissues." Frodl R., Gierschik P., Moepps B. J. Recept. Signal Transduct. 18:321-344(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Tissue: Peripheral blood lymphocyte. |
| [11] | "CXCR4-Lo: molecular cloning and functional expression of a novel human CXCR4 splice variant." Gupta S.K., Pillarisetti K. J. Immunol. 163:2368-2372(1999) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 2). Tissue: Neutrophil. |
| [12] | Fan Z., Li T., Li J., Luo B. Submitted (FEB-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [13] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Adrenal gland. |
| [14] | "cDNA clones of human proteins involved in signal transduction sequenced by the Guthrie cDNA resource center (www.cdna.org)." Warren C.N., Aronstam R.S., Sharma S.V. Submitted (FEB-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Lung. |
| [15] | "Cloning of human full-length CDSs in BD Creator(TM) system donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [16] | SeattleSNPs variation discovery resource Submitted (AUG-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. |
| [17] | "Generation and annotation of the DNA sequences of human chromosomes 2 and 4." Hillier L.W., Graves T.A., Fulton R.S., Fulton L.A., Pepin K.H., Minx P., Wagner-McPherson C., Layman D., Wylie K., Sekhon M., Becker M.C., Fewell G.A., Delehaunty K.D., Miner T.L., Nash W.E., Kremitzki C., Oddy L., Du H. Wilson R.K.Nature 434:724-731(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [18] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [19] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Colon. |
| [20] | "The lymphocyte chemoattractant SDF-1 is a ligand for LESTR/fusin and blocks HIV-1 entry." Bleul C.C., Farzan M., Choe H., Parolin C., Clark-Lewis I., Sodroski J., Springer T.A. Nature 382:829-833(1996) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [21] | "The CXC chemokine SDF-1 is the ligand for LESTR/fusin and prevents infection by T-cell-line-adapted HIV-1." Oberlin E., Amara A., Bachelerie F., Bessia C., Virelizier J.-L., Arenzana-Seisdedos F., Schwartz O., Heard J.-M., Clark-Lewis I., Legler D.F., Loetscher M., Baggiolini M., Moser B. Nature 382:833-835(1996) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION. |
| [22] | Erratum Oberlin E., Amara A., Bachelerie F., Bessia C., Virelizier J.-L., Arenzana-Seisdedos F., Schwartz O., Heard J.-M., Clark-Lewis I., Legler D.F., Loetscher M., Baggiolini M., Moser B. Nature 384:288-288(1996) |
| [23] | "Evidence for cell-surface association between fusin and the CD4-gp120 complex in human cell lines." Lapham C.K., Ouyang J., Chandrasekhar B., Nguyen N.Y., Dimitrov D.S., Golding H. Science 274:602-605(1996) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION AS HIV-1 CORECEPTOR. |
| [24] | "CD4-independent infection by HIV-2 is mediated by fusin/CXCR4." Endres M.J., Clapham P.R., Marsh M., Ahuja M., Turner J.D., McKnight A., Thomas J.F., Stoebenau-Haggarty B., Choe S., Vance P.J., Wells T.N.C., Power C.A., Sutterwala S.S., Doms R.W., Landau N.R., Hoxie J.A. Cell 87:745-756(1996) [PubMed] [Europe PMC] [Abstract] Cited for: CHARACTERIZATION AS HIV-2 PRIMARY RECEPTOR IN SOME ISOLATES. |
| [25] | "AMD3100, a small molecule inhibitor of HIV-1 entry via the CXCR4 co-receptor." Donzella G.A., Schols D., Lin S.W., Este J.A., Nagashima K.A., Maddon P.J., Allaway G.P., Sakmar T.P., Henson G., De Clercq E., Moore J.P. Nat. Med. 4:72-77(1998) [PubMed] [Europe PMC] [Abstract] Cited for: ANTAGONIST, INTERACTION WITH CXCL12, CHARACTERIZATION AS HIV-1 CORECEPTOR. |
| [26] | "Tyrosine sulfation of the amino terminus of CCR5 facilitates HIV-1 entry." Farzan M., Mirzabekov T., Kolchinsky P., Wyatt R., Cayabyab M., Gerard N.P., Gerard C., Sodroski J., Choe H. Cell 96:667-676(1999) [PubMed] [Europe PMC] [Abstract] Cited for: SULFATION. |
| [27] | "Effect of mutations in the second extracellular loop of CXCR4 on its utilization by human and feline immunodeficiency viruses." Brelot A., Heveker N., Adema K., Hosie M.J., Willett B., Alizon M. J. Virol. 73:2576-2586(1999) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, MUTAGENESIS OF ARG-183; ARG-188 AND ASP-193. |
| [28] | "Identification of CXCR4 domains that support coreceptor and chemokine receptor functions." Doranz B.J., Orsini M.J., Turner J.D., Hoffman T.L., Berson J.F., Hoxie J.A., Peiper S.C., Brass L.F., Doms R.W. J. Virol. 73:2752-2761(1999) [PubMed] [Europe PMC] [Abstract] Cited for: DOMAINS, INTERACTION WITH HIV-1 SURFACE PROTEIN GP120. |
| [29] | "beta-arrestin differentially regulates the chemokine receptor CXCR4-mediated signaling and receptor internalization, and this implicates multiple interaction sites between beta-arrestin and CXCR4." Cheng Z.J., Zhao J., Sun Y., Hu W., Wu Y.L., Cen B., Wu G.-X., Pei G. J. Biol. Chem. 275:2479-2485(2000) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH ARRB2, FUNCTION. |
| [30] | "Identification of residues of CXCR4 critical for human immunodeficiency virus coreceptor and chemokine receptor activities." Brelot A., Heveker N., Montes M., Alizon M. J. Biol. Chem. 275:23736-23744(2000) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH CXCL12, MUTAGENESIS OF 2-GLU--SER-9; 4-ILE--ASP-20; TYR-7; 10-ASP--ASP-20; TYR-12; 14-GLU-GLU-15; TYR-21; ASP-97; ASP-171; ASP-187; ASP-193; ASP-262; GLU-268 AND GLU-288. |
| [31] | "N-linked glycosylation of CXCR4 masks coreceptor function for CCR5-dependent human immunodeficiency virus type 1 isolates." Chabot D.J., Chen H., Dimitrov D.S., Broder C.C. J. Virol. 74:4404-4413(2000) [PubMed] [Europe PMC] [Abstract] Cited for: GLYCOSYLATION AT ASN-11, INTERACTION WITH HIV-1 ENV, SUBUNIT, MUTAGENESIS OF ASN-11; THR-13 AND ASN-176. |
| [32] | "Selective CXCR4 antagonism by Tat: implications for in vivo expansion of coreceptor use by HIV-1." Xiao H., Neuveut C., Tiffany H.L., Benkirane M., Rich E.A., Murphy P.M., Jeang K.-T. Proc. Natl. Acad. Sci. U.S.A. 97:11466-11471(2000) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HIV-1 TAT. |
| [33] | "The role of post-translational modifications of the CXCR4 amino terminus in stromal-derived factor 1 alpha association and HIV-1 entry." Farzan M., Babcock G.J., Vasilieva N., Wright P.L., Kiprilov E., Mirzabekov T., Choe H. J. Biol. Chem. 277:29484-29489(2002) [PubMed] [Europe PMC] [Abstract] Cited for: GLYCOSYLATION AT SER-18, IDENTIFICATION OF PROTEOGLYCAN, INTERACTION WITH CXCL12, SULFATION AT TYR-21, MUTAGENESIS OF TYR-7; THR-8; SER-9; TYR-12; SER-18 AND TYR-21. |
| [34] | "The E3 ubiquitin ligase AIP4 mediates ubiquitination and sorting of the G protein-coupled receptor CXCR4." Marchese A., Raiborg C., Santini F., Keen J.H., Stenmark H., Benovic J.L. Dev. Cell 5:709-722(2003) [PubMed] [Europe PMC] [Abstract] Cited for: UBIQUITINATION BY ITCH, SUBCELLULAR LOCATION. |
| [35] | "Mutations in the chemokine receptor gene CXCR4 are associated with WHIM syndrome, a combined immunodeficiency disease." Hernandez P.A., Gorlin R.J., Lukens J.N., Taniuchi S., Bohinjec J., Francois F., Klotman M.E., Diaz G.A. Nat. Genet. 34:70-74(2003) [PubMed] [Europe PMC] [Abstract] Cited for: DISEASE. |
| [36] | "Global, in vivo, and site-specific phosphorylation dynamics in signaling networks." Olsen J.V., Blagoev B., Gnad F., Macek B., Kumar C., Mortensen P., Mann M. Cell 127:635-648(2006) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [37] | "Endolyn (CD164) modulates the CXCL12-mediated migration of umbilical cord blood CD133+ cells." Forde S., Tye B.J., Newey S.E., Roubelakis M., Smythe J., McGuckin C.P., Pettengell R., Watt S.M. Blood 109:1825-1833(2007) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH CD164. |
| [38] | "Direct assessment of CXCR4 mutant conformations reveals complex link between receptor structure and G(alpha)(i) activation." Berchiche Y.A., Chow K.Y., Lagane B., Leduc M., Percherancier Y., Fujii N., Tamamura H., Bachelerie F., Heveker N. J. Biol. Chem. 282:5111-5115(2007) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, MUTAGENESIS OF ASN-119; ASP-133; ARG-134 AND TYR-135. |
| [39] | "Sequential tyrosine sulfation of CXCR4 by tyrosylprotein sulfotransferases." Seibert C., Veldkamp C.T., Peterson F.C., Chait B.T., Volkman B.F., Sakmar T.P. Biochemistry 47:11251-11262(2008) [PubMed] [Europe PMC] [Abstract] Cited for: SULFATION AT TYR-7; TYR-12 AND TYR-21, INTERACTION WITH CXCL12. |
| [40] | "Combining protein-based IMAC, peptide-based IMAC, and MudPIT for efficient phosphoproteomic analysis." Cantin G.T., Yi W., Lu B., Park S.K., Xu T., Lee J.-D., Yates J.R. III J. Proteome Res. 7:1346-1351(2008) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [41] | "A quantitative atlas of mitotic phosphorylation." Dephoure N., Zhou C., Villen J., Beausoleil S.A., Bakalarski C.E., Elledge S.J., Gygi S.P. Proc. Natl. Acad. Sci. U.S.A. 105:10762-10767(2008) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-319 AND SER-348, MASS SPECTROMETRY. Tissue: Cervix carcinoma. |
| [42] | "The E3 ubiquitin ligase atrophin interacting protein 4 binds directly to the chemokine receptor CXCR4 via a novel WW domain-mediated interaction." Bhandari D., Robia S.L., Marchese A. Mol. Biol. Cell 20:1324-1339(2009) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH ITCH, SUBCELLULAR LOCATION, PHOSPHORYLATION AT SER-324 AND SER-325, MUTAGENESIS OF SER-324; SER-325 AND SER-330. |
| [43] | "Site-specific phosphorylation of CXCR4 is dynamically regulated by multiple kinases and results in differential modulation of CXCR4 signaling." Busillo J.M., Armando S., Sengupta R., Meucci O., Bouvier M., Benovic J.L. J. Biol. Chem. 285:7805-7817(2010) [PubMed] [Europe PMC] [Abstract] Cited for: PHOSPHORYLATION AT SER-321; SER-324; SER-325; SER-330; SER-339 AND SER-351, INTERACTION WITH ARRB2 AND ARRC, FUNCTION, MASS SPECTROMETRY. |
| [44] | "CXC chemokine receptor 4 is a cell surface receptor for extracellular ubiquitin." Saini V., Marchese A., Majetschak M. J. Biol. Chem. 285:15566-15576(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH UBIQUITIN. |
| [45] | "Arrestin-2 interacts with the endosomal sorting complex required for transport machinery to modulate endosomal sorting of CXCR4." Malik R., Marchese A. Mol. Biol. Cell 21:2529-2541(2010) [PubMed] [Europe PMC] [Abstract] Cited for: FUNCTION, INTERACTION WITH UBIQUITIN. |
| [46] | "Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis." Olsen J.V., Vermeulen M., Santamaria A., Kumar C., Miller M.L., Jensen L.J., Gnad F., Cox J., Jensen T.S., Nigg E.A., Brunak S., Mann M. Sci. Signal. 3:RA3-RA3(2010) [PubMed] [Europe PMC] [Abstract] Cited for: IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]. Tissue: Cervix carcinoma. |
| [47] | "Human cytomegalovirus-encoded UL33 and UL78 heteromerize with host CCR5 and CXCR4 impairing their HIV coreceptor activity." Tadagaki K., Tudor D., Gbahou F., Tschische P., Waldhoer M., Bomsel M., Jockers R., Kamal M. Blood 119:4908-4918(2012) [PubMed] [Europe PMC] [Abstract] Cited for: INTERACTION WITH HHV-5 PROTEIN UL78. |
| [48] | "Recognition of a CXCR4 sulfotyrosine by the chemokine stromal cell-derived factor-1alpha (SDF-1alpha/CXCL12)." Veldkamp C.T., Seibert C., Peterson F.C., Sakmar T.P., Volkman B.F. J. Mol. Biol. 359:1400-1409(2006) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 1-38, SULFATION AT TYR-21, MASS SPECTROMETRY, INTERACTION WITH CXCL12. |
| [49] | "Structural basis of CXCR4 sulfotyrosine recognition by the chemokine SDF-1/CXCL12." Veldkamp C.T., Seibert C., Peterson F.C., De la Cruz N.B., Haugner J.C. III, Basnet H., Sakmar T.P., Volkman B.F. Sci. Signal. 1:RA4-RA4(2008) [PubMed] [Europe PMC] [Abstract] Cited for: STRUCTURE BY NMR OF 1-38 OF SULFATED MUTANT ALA-28 IN COMPLEX WITH CXCL12. |
| [50] | "Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists." Wu B., Chien E.Y., Mol C.D., Fenalti G., Liu W., Katritch V., Abagyan R., Brooun A., Wells P., Bi F.C., Hamel D.J., Kuhn P., Handel T.M., Cherezov V., Stevens R.C. Science 330:1066-1071(2010) [PubMed] [Europe PMC] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.5 ANGSTROMS) OF 2-325 OF MUTANTS LEU-125 AND THR-240 IN COMPLEX WITH ANTAGONISTS CVX15 AND IT1T, HOMODIMERIZATION, DISULFIDE BONDS. |
| + | Additional computationally mapped references. |
Web resources
| CXCR4base CXCR4 mutation db |
| Wikipedia CXC chemokine receptors entry |
| Wikipedia CXCR4 entry |
| SeattleSNPs |
Cross-references
Sequence databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| EMBL GenBank DDBJ | L01639 mRNA. Translation: AAA16594.1. M99293 mRNA. Translation: AAA16617.1. X71635 mRNA. Translation: CAA50641.1. L06797 mRNA. Translation: AAA03209.1. D10924 mRNA. Translation: BAA01722.1. AF005058 Genomic DNA. Translation: AAB93982.1. AF052572 Genomic DNA. Translation: AAC34581.1. AJ224869 Genomic DNA. Translation: CAA12166.1. Sequence problems. AF025375 mRNA. Translation: AAB81970.1. Y14739 Genomic DNA. Translation: CAA75034.1. AF147204 mRNA. Translation: AAF00130.1. AF348491 mRNA. Translation: AAK29630.1. AK312244 mRNA. Translation: BAG35177.1. AY242129 mRNA. Translation: AAO92296.1. BT006660 mRNA. Translation: AAP35306.1. AY728138 Genomic DNA. Translation: AAU05775.1. AC068492 Genomic DNA. Translation: AAY24044.1. CH471058 Genomic DNA. Translation: EAX11616.1. BC020968 mRNA. Translation: AAH20968.1. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IPI | IPI00028159. IPI00216445. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PIR | A45747. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RefSeq | NP_001008540.1. NM_001008540.1. NP_003458.1. NM_003467.2. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| UniGene | Hs.593413. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
3D structure databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PDBe RCSB PDB PDBj |
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ProteinModelPortal | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ModBase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein-protein interaction databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DIP | DIP-34773N. DIP-46290N. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IntAct | P61073. 7 interactions. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MINT | MINT-6630550. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| STRING | 9606.ENSP00000386884. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein family/group databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GPCRDB | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
PTM databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PhosphoSite | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Polymorphism databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DMDM | 46577576. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Proteomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PaxDb | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PRIDE | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protocols and materials databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DNASU | 7852. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| StructuralBiologyKnowledgebase | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Genome annotation databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Ensembl | ENST00000241393; ENSP00000241393; ENSG00000121966. ENST00000409817; ENSP00000386884; ENSG00000121966. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GeneID | 7852. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KEGG | hsa:7852. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| UCSC | uc002tuy.3. human. uc002tuz.3. human. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Organism-specific databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CTD | 7852. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GeneCards | GC02M136871. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HGNC | HGNC:2561. CXCR4. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HPA | CAB011447. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| MIM | 162643. gene. 193670. phenotype. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| neXtProt | NX_P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Orphanet | 51636. WHIM syndrome. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PharmGKB | PA27058. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GenAtlas | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Phylogenomic databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| eggNOG | NOG328039. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOVERGEN | HBG106917. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| KO | K04189. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| OMA | EENAHFN. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Enzyme and pathway databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Pathway_Interaction_DB | ephrinbrevpathway. Ephrin B reverse signaling. hif1_tfpathway. HIF-1-alpha transcription factor network. s1p_s1p3_pathway. S1P3 pathway. syndecan_4_pathway. Syndecan-4-mediated signaling events. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Reactome | REACT_111102. Signal Transduction. REACT_116125. Disease. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Gene expression databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ArrayExpress | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Bgee | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| CleanEx | HS_CXCR4. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Genevestigator | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GermOnline | ENSG00000121966. Homo sapiens. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Family and domain databases | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| InterPro | IPR001277. Chemokine_CXCR4. IPR022726. Chemokine_CXCR4_N. IPR000355. Chemokine_rcpt. IPR000276. GPCR_Rhodpsn. IPR017452. GPCR_Rhodpsn_7TM. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Pfam | PF00001. 7tm_1. 1 hit. PF12109. CXCR4_N. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PRINTS | PR00657. CCCHEMOKINER. PR00645. CXCCHMKINER4. PR00237. GPCRRHODOPSN. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PROSITE | PS00237. G_PROTEIN_RECEP_F1_1. 1 hit. PS50262. G_PROTEIN_RECEP_F1_2. 1 hit. [Graphical view] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ProtoNet | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Other | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
| BindingDB | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChEMBL | CHEMBL2107. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| ChiTaRS | CXCR4. human. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| DrugBank | DB00452. Framycetin. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| EvolutionaryTrace | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GenomeRNAi | 7852. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| NextBio | 30286. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| PMAP-CutDB | P61073. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
| SOURCE | Search... | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Entry information
| Entry name | CXCR4_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P61073 Secondary accession number(s): B2R5N0 Q9UKN2 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| 7-transmembrane G-linked receptors List of 7-transmembrane G-linked receptor entries |
| Human cell differentiation molecules CD nomenclature of surface proteins of human leucocytes and list of entries |
| Human chromosome 2 Human chromosome 2: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PDB cross-references Index of Protein Data Bank (PDB) cross-references |
| SIMILARITY comments Index of protein domains and families |

Clusters with
