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Protein

30S ribosomal protein S28e

Gene

rps28e

Organism
Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S28e
Gene namesi
Name:rps28e
Ordered Locus Names:PH1495.2
ORF Names:PHS040
OrganismiPyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Taxonomic identifieri70601 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000752 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368581 – 7130S ribosomal protein S28eAdd BLAST71

Interactioni

Protein-protein interaction databases

STRINGi70601.PHS040

Structurei

Secondary structure

171
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi8 – 14Combined sources7
Beta strandi20 – 36Combined sources17
Beta strandi40 – 47Combined sources8
Beta strandi54 – 56Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1NY4NMR-A1-71[»]
ProteinModelPortaliP61030
SMRiP61030
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP61030

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04314 Archaea
COG2053 LUCA
HOGENOMiHOG000224552
KOiK02979
OMAiMHGEASQ
OrthoDBiPOG093Z0LMP

Family and domain databases

CDDicd04457 S1_S28E, 1 hit
HAMAPiMF_00292 Ribosomal_S28e, 1 hit
InterProiView protein in InterPro
IPR012340 NA-bd_OB-fold
IPR000289 Ribosomal_S28e
IPR028626 Ribosomal_S28e_CS
PANTHERiPTHR10769 PTHR10769, 1 hit
PfamiView protein in Pfam
PF01200 Ribosomal_S28e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005541 Ribosomal_S28e, 1 hit
SUPFAMiSSF50249 SSF50249, 1 hit
PROSITEiView protein in PROSITE
PS00961 RIBOSOMAL_S28E, 1 hit

Sequencei

Sequence statusi: Complete.

P61030-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEDEGYPAE VIEIIGRTGT TGDVTQVKVR ILEGRDKGRV IRRNVRGPVR
60 70
VGDILILRET EREAREIKSR R
Length:71
Mass (Da):8,086
Last modified:April 26, 2004 - v1
Checksum:i59D9E88DF6923097
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000001 Genomic DNA Translation: BAA30603.1
PIRiC71025
RefSeqiWP_010867791.1, NC_000961.1

Genome annotation databases

EnsemblBacteriaiBAA30603; BAA30603; BAA30603
GeneIDi33322496
KEGGipho:PHS040

Similar proteinsi

Entry informationi

Entry nameiRS28_PYRHO
AccessioniPrimary (citable) accession number: P61030
Secondary accession number(s): O74014
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: April 26, 2004
Last modified: April 25, 2018
This is version 82 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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