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Protein

30S ribosomal protein S28e

Gene

rps28e

Organism
Pyrococcus abyssi (strain GE5 / Orsay)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S28e
Gene namesi
Name:rps28e
Ordered Locus Names:PYRAB06760
ORF Names:PAB7165
OrganismiPyrococcus abyssi (strain GE5 / Orsay)
Taxonomic identifieri272844 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaThermococciThermococcalesThermococcaceaePyrococcus
Proteomesi
  • UP000000810 Componenti: Chromosome
  • UP000009139 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001368561 – 7130S ribosomal protein S28eAdd BLAST71

Interactioni

Protein-protein interaction databases

STRINGi272844.PAB7165.

Structurei

3D structure databases

ProteinModelPortaliP61029.
SMRiP61029.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiarCOG04314. Archaea.
COG2053. LUCA.
HOGENOMiHOG000224552.
KOiK02979.
OMAiMHGEASQ.
OrthoDBiPOG093Z0LMP.

Family and domain databases

CDDicd04457. S1_S28E. 1 hit.
HAMAPiMF_00292. Ribosomal_S28e. 1 hit.
InterProiView protein in InterPro
IPR012340. NA-bd_OB-fold.
IPR000289. Ribosomal_S28e.
IPR028626. Ribosomal_S28e_CS.
PANTHERiPTHR10769. PTHR10769. 1 hit.
PfamiView protein in Pfam
PF01200. Ribosomal_S28e. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005541. Ribosomal_S28e. 1 hit.
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiView protein in PROSITE
PS00961. RIBOSOMAL_S28E. 1 hit.

Sequencei

Sequence statusi: Complete.

P61029-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEDEGYPAE VIEIIGRTGT TGDVTQVKVR ILEGRDKGRV IRRNVRGPVR
60 70
VGDILILRET EREAREIKSR R
Length:71
Mass (Da):8,086
Last modified:April 26, 2004 - v1
Checksum:i59D9E88DF6923097
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AJ248285 Genomic DNA. Translation: CAB49589.1.
HE613800 Genomic DNA. Translation: CCE70061.1.
PIRiD75109.
RefSeqiWP_010867791.1. NC_000868.1.

Genome annotation databases

EnsemblBacteriaiCAB49589; CAB49589; PAB7165.
GeneIDi28494070.
KEGGipab:PAB7165.
PATRICifig|272844.11.peg.706.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiRS28_PYRAB
AccessioniPrimary (citable) accession number: P61029
Secondary accession number(s): G8ZJD4, O74014
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: April 26, 2004
Last modified: June 7, 2017
This is version 75 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families