Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

40S ribosomal protein S20

Gene

Rps20

Organism
Mus musculus (Mouse)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-72649. Translation initiation complex formation.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-MMU-72702. Ribosomal scanning and start codon recognition.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S20
Gene namesi
Name:Rps20
OrganismiMus musculus (Mouse)
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
Proteomesi
  • UP000000589 Componenti: Chromosome 4

Organism-specific databases

MGIiMGI:1914677. Rps20.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methionineiRemovedBy similarity
Chaini2 – 11911840S ribosomal protein S20PRO_0000146684Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanineBy similarity
Modified residuei8 – 81N6-succinyllysine; alternateCombined sources
Cross-linki8 – 8Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternateBy similarity
Modified residuei9 – 91PhosphothreonineBy similarity
Modified residuei34 – 341N6-acetyllysineCombined sources
Modified residuei75 – 751N6-acetyllysineCombined sources
Modified residuei93 – 931PhosphoserineBy similarity

Keywords - PTMi

Acetylation, Isopeptide bond, Phosphoprotein, Ubl conjugation

Proteomic databases

EPDiP60867.
PaxDbiP60867.
PeptideAtlasiP60867.
PRIDEiP60867.

PTM databases

iPTMnetiP60867.
PhosphoSiteiP60867.
SwissPalmiP60867.

Expressioni

Gene expression databases

BgeeiENSMUSG00000028234.
CleanExiMM_RPS20.
ExpressionAtlasiP60867. baseline and differential.
GenevisibleiP60867. MM.

Interactioni

Subunit structurei

Component of the 40S small ribosomal subunit.By similarity

Protein-protein interaction databases

BioGridi212179. 3 interactions.
IntActiP60867. 6 interactions.
MINTiMINT-1869966.
STRINGi10090.ENSMUSP00000120528.

Structurei

3D structure databases

ProteinModelPortaliP60867.
SMRiP60867. Positions 17-117.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S10P family.Curated

Phylogenomic databases

eggNOGiKOG0900. Eukaryota.
COG0051. LUCA.
HOGENOMiHOG000270245.
HOVERGENiHBG004448.
InParanoidiP60867.
KOiK02969.
OMAiWDRYELK.
OrthoDBiEOG091G0VNB.
PhylomeDBiP60867.
TreeFamiTF300222.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
IPR005729. Ribosomal_S10_euk/arc.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01046. uS10_euk_arch. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P60867-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFKDTGKTP VEPEVAIHRI RITLTSRNVK SLEKVCADLI RGAKEKNLKV
60 70 80 90 100
KGPVRMPTKT LRITTRKTPC GEGSKTWDRF QMRIHKRLID LHSPSEIVKQ
110
ITSISIEPGV EVEVTIADA
Length:119
Mass (Da):13,373
Last modified:April 13, 2004 - v1
Checksum:i8802DF7894ADDF94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002405 mRNA. Translation: BAB22075.1.
AK014594 mRNA. Translation: BAB29450.1.
BC011323 mRNA. Translation: AAH11323.1.
CCDSiCCDS17940.1.
RefSeqiNP_080423.1. NM_026147.6.
UniGeneiMm.21938.
Mm.473992.

Genome annotation databases

EnsembliENSMUST00000138502; ENSMUSP00000120528; ENSMUSG00000028234.
GeneIDi67427.
KEGGimmu:67427.
UCSCiuc008rwn.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AK002405 mRNA. Translation: BAB22075.1.
AK014594 mRNA. Translation: BAB29450.1.
BC011323 mRNA. Translation: AAH11323.1.
CCDSiCCDS17940.1.
RefSeqiNP_080423.1. NM_026147.6.
UniGeneiMm.21938.
Mm.473992.

3D structure databases

ProteinModelPortaliP60867.
SMRiP60867. Positions 17-117.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi212179. 3 interactions.
IntActiP60867. 6 interactions.
MINTiMINT-1869966.
STRINGi10090.ENSMUSP00000120528.

PTM databases

iPTMnetiP60867.
PhosphoSiteiP60867.
SwissPalmiP60867.

Proteomic databases

EPDiP60867.
PaxDbiP60867.
PeptideAtlasiP60867.
PRIDEiP60867.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSMUST00000138502; ENSMUSP00000120528; ENSMUSG00000028234.
GeneIDi67427.
KEGGimmu:67427.
UCSCiuc008rwn.1. mouse.

Organism-specific databases

CTDi6224.
MGIiMGI:1914677. Rps20.

Phylogenomic databases

eggNOGiKOG0900. Eukaryota.
COG0051. LUCA.
HOGENOMiHOG000270245.
HOVERGENiHBG004448.
InParanoidiP60867.
KOiK02969.
OMAiWDRYELK.
OrthoDBiEOG091G0VNB.
PhylomeDBiP60867.
TreeFamiTF300222.

Enzyme and pathway databases

ReactomeiR-MMU-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-MMU-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-MMU-72649. Translation initiation complex formation.
R-MMU-72689. Formation of a pool of free 40S subunits.
R-MMU-72695. Formation of the ternary complex, and subsequently, the 43S complex.
R-MMU-72702. Ribosomal scanning and start codon recognition.
R-MMU-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-MMU-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-MMU-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Miscellaneous databases

ChiTaRSiRps20. mouse.
PROiP60867.
SOURCEiSearch...

Gene expression databases

BgeeiENSMUSG00000028234.
CleanExiMM_RPS20.
ExpressionAtlasiP60867. baseline and differential.
GenevisibleiP60867. MM.

Family and domain databases

Gene3Di3.30.70.600. 1 hit.
HAMAPiMF_00508. Ribosomal_S10. 1 hit.
InterProiIPR001848. Ribosomal_S10.
IPR018268. Ribosomal_S10_CS.
IPR027486. Ribosomal_S10_dom.
IPR005729. Ribosomal_S10_euk/arc.
[Graphical view]
PANTHERiPTHR11700. PTHR11700. 1 hit.
PfamiPF00338. Ribosomal_S10. 1 hit.
[Graphical view]
PRINTSiPR00971. RIBOSOMALS10.
SMARTiSM01403. Ribosomal_S10. 1 hit.
[Graphical view]
SUPFAMiSSF54999. SSF54999. 1 hit.
TIGRFAMsiTIGR01046. uS10_euk_arch. 1 hit.
PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRS20_MOUSE
AccessioniPrimary (citable) accession number: P60867
Secondary accession number(s): P17075
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 13, 2004
Last sequence update: April 13, 2004
Last modified: September 7, 2016
This is version 118 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. MGD cross-references
    Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.