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Protein

UPF0299 membrane protein YohJ

Gene

yohJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:EG12023-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0299 membrane protein YohJ
Gene namesi
Name:yohJ
Ordered Locus Names:b2141, JW2129
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12023 yohJ

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 6PeriplasmicSequence analysis6
Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Topological domaini28 – 30CytoplasmicSequence analysis3
Transmembranei31 – 51HelicalSequence analysisAdd BLAST21
Topological domaini52 – 62PeriplasmicSequence analysisAdd BLAST11
Transmembranei63 – 83HelicalSequence analysisAdd BLAST21
Topological domaini84 – 92CytoplasmicSequence analysis9
Transmembranei93 – 113HelicalSequence analysisAdd BLAST21
Topological domaini114 – 132PeriplasmicSequence analysisAdd BLAST19

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000728061 – 132UPF0299 membrane protein YohJAdd BLAST132

Proteomic databases

PaxDbiP60632
PRIDEiP60632

Interactioni

Protein-protein interaction databases

BioGridi4262175, 7 interactors
IntActiP60632, 1 interactor
STRINGi316385.ECDH10B_2298

Structurei

3D structure databases

ProteinModelPortaliP60632
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0299 family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105VAW Bacteria
COG1380 LUCA
HOGENOMiHOG000253615
InParanoidiP60632
KOiK06518
OMAiMSVMFIP
PhylomeDBiP60632

Family and domain databases

HAMAPiMF_01144 UPF0299, 1 hit
InterProiView protein in InterPro
IPR005538 LrgA/CidA
IPR022957 Uncharacterised_UPF0299
PANTHERiPTHR33931 PTHR33931, 1 hit
PfamiView protein in Pfam
PF03788 LrgA, 1 hit

Sequencei

Sequence statusi: Complete.

P60632-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKTLNIIWQ YLRAFVLIYA CLYAGIFIAS LLPVTIPGSI IGMLILFVLL
60 70 80 90 100
ALQILPAKWV NPGCYVLIRY MALLFVPIGV GVMQYFDLLR AQFGPVVVSC
110 120 130
AVSTLVVFLV VSWSSQLVHG ERKVVGQKGS EE
Length:132
Mass (Da):14,579
Last modified:March 29, 2004 - v2
Checksum:i263DA3254DEF81A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00007 Genomic DNA Translation: AAA60504.1
U00096 Genomic DNA Translation: AAC75202.1
AP009048 Genomic DNA Translation: BAE76618.1
PIRiD64982
RefSeqiNP_416646.1, NC_000913.3
WP_001295452.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75202; AAC75202; b2141
BAE76618; BAE76618; BAE76618
GeneIDi949127
KEGGiecj:JW2129
eco:b2141
PATRICifig|1411691.4.peg.101

Similar proteinsi

Entry informationi

Entry nameiYOHJ_ECOLI
AccessioniPrimary (citable) accession number: P60632
Secondary accession number(s): P33372, Q2MAT8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 15, 2004
Last sequence update: March 29, 2004
Last modified: March 28, 2018
This is version 98 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health