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Protein

50S ribosomal protein L19

Gene

rplS

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Contacts the 16S rRNA of the 30S subunit (part of bridge B6), connecting the 2 subunits.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein, RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:G1GKC-1038-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L19
Gene namesi
Name:rplS
Ordered Locus Names:TTHA1031
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
Proteomesi
  • UP000000532 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001635581 – 14650S ribosomal protein L19Add BLAST146

Interactioni

Subunit structurei

Part of the 50S risobomal subunit. Contacts protein L14. Forms a bridge to the 30S subunit in the 70S ribosome, contacting the 16S rRNA.

Protein-protein interaction databases

STRINGi300852.TTHA1031

Structurei

Secondary structure

1146
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Helixi4 – 11Combined sources8
Beta strandi48 – 53Combined sources6
Beta strandi56 – 58Combined sources3
Beta strandi60 – 67Combined sources8
Beta strandi70 – 76Combined sources7
Beta strandi78 – 81Combined sources4
Beta strandi95 – 97Combined sources3
Helixi100 – 105Combined sources6
Helixi109 – 113Combined sources5
Helixi118 – 125Combined sources8
Helixi126 – 128Combined sources3
Turni134 – 136Combined sources3

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
1VVJX-ray3.44RT/YT1-146[»]
1VY4X-ray2.60BT/DT1-146[»]
1VY5X-ray2.55BT/DT1-146[»]
1VY6X-ray2.90BT/DT1-146[»]
1VY7X-ray2.80BT/DT1-146[»]
4L47X-ray3.22RT/YT1-146[»]
4L71X-ray3.90RT/YT1-146[»]
4LELX-ray3.90RT/YT1-146[»]
4LFZX-ray3.92RT/YT1-146[»]
4LNTX-ray2.94RT/YT1-146[»]
4LSKX-ray3.48RT/YT1-146[»]
4LT8X-ray3.14RT/YT1-146[»]
4P6FX-ray3.60RT/YT1-146[»]
4P70X-ray3.68RT/YT1-146[»]
4TUAX-ray3.60RT/YT1-146[»]
4TUBX-ray3.60RT/YT1-146[»]
4TUCX-ray3.60RT/YT1-146[»]
4TUDX-ray3.60RT/YT1-146[»]
4TUEX-ray3.50RT/YT1-146[»]
4V42X-ray5.50R1-146[»]
4V4PX-ray5.50R1-146[»]
4V4XX-ray5.00BS1-146[»]
4V4YX-ray5.50BS1-146[»]
4V4ZX-ray4.51BS1-146[»]
4V51X-ray2.80BT/DT1-146[»]
4V5AX-ray3.50BT/DT1-146[»]
4V5CX-ray3.30BT/DT1-146[»]
4V5DX-ray3.50BT/DT1-146[»]
4V5EX-ray3.45BT/DT1-146[»]
4V5FX-ray3.60BT/DT1-146[»]
4V5GX-ray3.60BT/DT1-146[»]
4V5JX-ray3.10BT/DT1-146[»]
4V5KX-ray3.20BT/DT1-146[»]
4V5LX-ray3.10BT1-146[»]
4V5Melectron microscopy7.80BT1-146[»]
4V5Nelectron microscopy7.60BT1-146[»]
4V5PX-ray3.10BT/DT1-146[»]
4V5QX-ray3.10BT/DT1-146[»]
4V5RX-ray3.10BT/DT1-146[»]
4V5SX-ray3.10BT/DT1-146[»]
4V68electron microscopy6.40BT1-138[»]
4V6AX-ray3.10BT/DT1-146[»]
4V6FX-ray3.10AR/DR1-146[»]
4V6GX-ray3.50BR/DR1-146[»]
4V7JX-ray3.30AT/BT1-146[»]
4V7KX-ray3.60AT/BT1-146[»]
4V7LX-ray3.00BT/DT1-146[»]
4V7MX-ray3.45BT/DT1-146[»]
4V7WX-ray3.00BT/DT1-146[»]
4V7XX-ray3.00BT/DT1-146[»]
4V7YX-ray3.00BT/DT1-146[»]
4V7ZX-ray3.10BT/DT1-146[»]
4V87X-ray3.10AR/DR1-137[»]
4V8AX-ray3.20AT/BT1-146[»]
4V8BX-ray3.00BR/DR1-146[»]
4V8CX-ray3.30AR/BR1-146[»]
4V8DX-ray3.00BR/DR1-146[»]
4V8EX-ray3.30AR/CR1-146[»]
4V8FX-ray3.30AR/DR1-146[»]
4V8GX-ray3.00BT/DT1-146[»]
4V8HX-ray3.10BT/DT1-146[»]
4V8IX-ray2.70BT/DT1-146[»]
4V8JX-ray3.90BT/DT1-146[»]
4V8NX-ray3.10BT/DT1-146[»]
4V8OX-ray3.80BT1-146[»]
4V8QX-ray3.10AT1-146[»]
4V8UX-ray3.70BT/DT1-146[»]
4V8XX-ray3.35BT/DT1-146[»]
4V90X-ray2.95BT1-146[»]
4V95X-ray3.20BT/DT1-146[»]
4V97X-ray3.52BT/DT1-146[»]
4V9AX-ray3.30BR/DR1-146[»]
4V9BX-ray3.10BR/DR1-146[»]
4V9HX-ray2.86BT1-146[»]
4V9IX-ray3.30BT/DT1-137[»]
4V9RX-ray3.00BT/DT1-146[»]
4V9SX-ray3.10BT/DT1-146[»]
4W2EX-ray2.90T1-146[»]
4W2FX-ray2.40BT/DT1-146[»]
4W2GX-ray2.55BT/DT1-146[»]
4W2HX-ray2.70BT/DT1-146[»]
4W2IX-ray2.70BT/DT1-146[»]
4W4GX-ray3.30RT/YT1-146[»]
4WPOX-ray2.80AT/CT1-146[»]
4WQ1X-ray3.1075/B81-137[»]
4WQFX-ray2.80AT/CT1-146[»]
4WQRX-ray3.1575/B81-146[»]
4WQUX-ray2.80AT/CT1-146[»]
4WQYX-ray2.80AT/CT1-146[»]
4WR6X-ray3.0575/B81-146[»]
4WRAX-ray3.0575/B81-146[»]
4WROX-ray3.05B81-146[»]
4WSDX-ray2.9575/B81-146[»]
4WSMX-ray3.3075/B81-146[»]
4WT1X-ray3.0575/B81-146[»]
4WT8X-ray3.40CS/DS1-137[»]
4WU1X-ray3.2075/B81-146[»]
4WZDX-ray3.1075/B81-146[»]
4WZOX-ray3.3075/B81-146[»]
4Y4OX-ray2.301T/2T1-146[»]
4Y4PX-ray2.501T/2T1-146[»]
4YPBX-ray3.40RT/YT1-146[»]
4YZVX-ray3.10RT/YT1-146[»]
4Z3SX-ray2.651T/2T1-146[»]
4Z8CX-ray2.901T/2T1-146[»]
4ZERX-ray3.101T/2T1-131[»]
4ZSNX-ray3.60RT/YT1-146[»]
5A9Zelectron microscopy4.70AQ1-117[»]
5AA0electron microscopy5.00AQ1-117[»]
5CZPX-ray3.30RT/YT1-146[»]
5D8BX-ray3.63JB/N1-146[»]
5DFEX-ray3.10RT/YT1-146[»]
5DOXX-ray3.101T/2T1-146[»]
5DOYX-ray2.601T/2T1-146[»]
5E7KX-ray3.2075/B81-146[»]
5E81X-ray2.9575/B81-146[»]
5EL4X-ray3.1575/B81-146[»]
5EL5X-ray3.1575/B81-146[»]
5EL6X-ray3.1075/B81-146[»]
5EL7X-ray3.1575/B81-146[»]
5F8KX-ray2.801T/2T1-131[»]
5FDUX-ray2.901T/2T1-131[»]
5FDVX-ray2.801T/2T1-131[»]
5HAUX-ray3.001R/2R1-146[»]
5HCPX-ray2.891T/2T1-146[»]
5HCQX-ray2.801T/2T1-146[»]
5HCRX-ray2.801T/2T1-146[»]
5HD1X-ray2.701T/2T1-146[»]
5IB7X-ray2.9975/B81-146[»]
5IB8X-ray3.1375/B81-146[»]
5IBBX-ray2.9675/B81-146[»]
5IMQelectron microscopy3.80l1-146[»]
5IMRelectron microscopy-l1-146[»]
5J30X-ray3.20RT/YT1-146[»]
5J3CX-ray3.04RT/YT1-146[»]
5J4BX-ray2.601T/2T1-146[»]
5J4CX-ray2.801T/2T1-146[»]
5J8BX-ray2.60T1-146[»]
5NDKX-ray2.9575/B81-146[»]
5OT7electron microscopy3.80u1-138[»]
5UQ7electron microscopy3.50T1-131[»]
5UQ8electron microscopy3.20T1-131[»]
5VP2X-ray2.801T/2T1-146[»]
5W4KX-ray2.701T/2T1-146[»]
5WISX-ray2.701T/2T1-146[»]
5WITX-ray2.601T/2T1-146[»]
6C5LX-ray3.20BT/DT1-146[»]
6CFJX-ray2.801T/2T1-146[»]
6CFKX-ray2.701T/2T1-146[»]
6CFLX-ray2.601T/2T1-146[»]
6FKRX-ray3.201T/2T1-131[»]
ProteinModelPortaliP60490
SMRiP60490
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP60490

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4108YY1 Bacteria
COG0335 LUCA
HOGENOMiHOG000016265
KOiK02884
OMAiTITVYYE
PhylomeDBiP60490

Family and domain databases

Gene3Di2.30.30.790, 1 hit
HAMAPiMF_00402 Ribosomal_L19, 1 hit
InterProiView protein in InterPro
IPR038657 L19_sf
IPR001857 Ribosomal_L19
IPR018257 Ribosomal_L19_CS
IPR008991 Translation_prot_SH3-like_sf
PANTHERiPTHR15680 PTHR15680, 2 hits
PfamiView protein in Pfam
PF01245 Ribosomal_L19, 1 hit
PIRSFiPIRSF002191 Ribosomal_L19, 1 hit
PRINTSiPR00061 RIBOSOMALL19
SUPFAMiSSF50104 SSF50104, 1 hit
TIGRFAMsiTIGR01024 rplS_bact, 1 hit
PROSITEiView protein in PROSITE
PS01015 RIBOSOMAL_L19, 1 hit

Sequencei

Sequence statusi: Complete.

P60490-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRGALIKLV ESRYVRTDLP EFRPGDTVRV SYKVKEGNRT RIQDFEGIVI
60 70 80 90 100
RIRRNGFNTT FTVRKVSYGV GVERIFPLHS PLIQKIDIVQ RGRARRAKLY
110 120 130 140
FIRNLSDREI RRKLRADRKR IDQDRAAERA AKEEAQKAQE PKASQE
Length:146
Mass (Da):17,152
Last modified:March 29, 2005 - v2
Checksum:i119CC349889AF6A7
GO

Mass spectrometryi

Molecular mass is 17152 Da from positions 1 - 146. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA Translation: BAD70854.1
RefSeqiWP_011228391.1, NC_006461.1
YP_144297.1, NC_006461.1

Genome annotation databases

EnsemblBacteriaiBAD70854; BAD70854; BAD70854
GeneIDi3168297
KEGGittj:TTHA1031
PATRICifig|300852.9.peg.1011

Similar proteinsi

Entry informationi

Entry nameiRL19_THET8
AccessioniPrimary (citable) accession number: P60490
Secondary accession number(s): Q5SJH7
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 1, 2004
Last sequence update: March 29, 2005
Last modified: May 23, 2018
This is version 126 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

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