P60117 (ATP9_SOLLC) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
ATP synthase subunit 9, mitochondrial

Alternative name(s):
Lipid-binding protein

Gene names

Name:

ATP9

Encoded on

Mitochondrion

Organism

Solanum lycopersicum (Tomato) (Lycopersicon esculentum)

Taxonomic identifier

4081 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › asterids › lamiids › Solanales › Solanaceae › Solanoideae › Solaneae › Solanum › Lycopersicon

Protein attributes

Sequence length	74 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Function	This protein is one of the chains of the nonenzymatic membrane component (F0) of mitochondrial ATPase.
Subunit structure	F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a, b and c.
Subcellular location	Mitochondrion membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the ATPase C chain family.
RNA editing	Edited at positions 7, 17, 28, 31, 61, 64 and 75. By similarity. The stop codon at position 75 is created by RNA editing.

Ontologies

Keywords
Biological process	Hydrogen ion transport Ion transport Transport
Cellular component	CF(0) Membrane Mitochondrion
Coding sequence diversity	RNA editing
Domain	Transmembrane Transmembrane helix
Ligand	ATP-binding Lipid-binding Nucleotide-binding
Gene Ontology (GO)
Biological process	ATP hydrolysis coupled proton transport Inferred from electronic annotation. Source: InterPro ATP synthesis coupled proton transport Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW mitochondrial membrane Inferred from electronic annotation. Source: UniProtKB-SubCell proton-transporting ATP synthase complex, coupling factor F(o) Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW hydrogen ion transmembrane transporter activity Inferred from electronic annotation. Source: InterPro lipid binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 74	74	ATP synthase subunit 9, mitochondrial		PRO_0000112213
Regions
	Transmembrane	8 – 28	21	Helical; Potential
	Transmembrane	50 – 70	21	Helical; Potential
Sites
	Site	57	1	Reversibly protonated during proton transport By similarity

Sequences

	Sequence		Length	Mass (Da)
	P60117 [UniParc]. Last modified November 28, 2003. Version 1. Checksum: 6593295037555E82	FASTA	74	7,563
	10 20 30 40 50 60 MLEGAKLMGA GAATIALAGA AIGIGNVFSS LIHSVARNPS LAKQLFGYAI LGFALTEAIA 70 LFALMMAFLI SFVF

References

[1]	"Nucleotide sequence of the F0-ATPase subunit 9 gene from tomato mitochondria." Kazama S., Suzuki T., Kadowaki K., Akihama T. Nucleic Acids Res. 18:5879-5879(1990) [PubMed: 2145550] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Ponderosa.

Cross-references

Sequence databases
EMBL GenBank DDBJ	X54409 Genomic DNA. Translation: CAA38272.1. Sequence problems.
PIR	LWTOA. S11494.
3D structure databases
ProteinModelPortal	P60117.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000454. ATPase_F0-cplx_csu. IPR020537. ATPase_F0-cplx_csu_DDCD_BS. IPR002379. ATPase_F0/V0-cplx_csu. [Graphical view]
Gene3D	G3DSA:1.20.20.10. ATPase_F0/V0_c. 1 hit.
Pfam	PF00137. ATP-synt_C. 1 hit. [Graphical view]
PRINTS	PR00124. ATPASEC.
SUPFAM	SSF81333. ATPase_F0/V0_c. 1 hit.
PROSITE	PS00605. ATPASE_C. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

ATP9_SOLLC

Accession

Primary (citable) accession number: P60117
Secondary accession number(s): P05497, P05498

Entry history

Integrated into UniProtKB/Swiss-Prot:	November 28, 2003
Last sequence update:	November 28, 2003
Last modified:	January 25, 2012
This is version 51 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program