Reviewed, UniProtKB/Swiss-Prot P59474 (DAPB_BUCBP)

Names and origin

Protein names

Recommended name:
    Dihydrodipicolinate reductase
      Short name=DHPR
    EC=1.3.1.26

Gene names

Name:	dapB
Ordered Locus Names:	bbp_136

Organism

Buchnera aphidicola subsp. Baizongia pistaciae [Complete proteome] [HAMAP]

Taxonomic identifier

135842 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Catalytic activity	2,3,4,5-tetrahydrodipicolinate + NAD(P)+ = 2,3-dihydrodipicolinate + NAD(P)H. HAMAP MF_00102
Pathway	Amino-acid biosynthesis; L-lysine biosynthesis via DAP pathway; tetrahydrodipicolinate from L-aspartate: step 4/4. HAMAP MF_00102
Subunit structure	Homotetramer By similarity.
Subcellular location	Cytoplasm By similarity.
Sequence similarities	Belongs to the dihydrodipicolinate reductase family.

Ontologies

Keywords
Biological process	Amino-acid biosynthesis Diaminopimelate biosynthesis Lysine biosynthesis
Cellular component	Cytoplasm
Ligand	NADP
Molecular function	Oxidoreductase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	diaminopimelate biosynthetic process Inferred from electronic annotation. Source: HAMAP oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	binding Inferred from electronic annotation. Source: InterPro dihydrodipicolinate reductase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 272	272	Dihydrodipicolinate reductase HAMAP MF_00102		PRO_0000141421

Sequences

	Sequence		Length	Mass (Da)
	P59474-1 [UniParc]. Last modified March 28, 2003. Version 1. Checksum: 5489FA4B6D062A8B	FASTA	272	30,261
	10 20 30 40 50 60 MKKTTLNIAI SGALGKMGIN LIHEIYHTKN VFLTAAIVKN NSPYVQKNVG KITKIGEINI 70 80 90 100 110 120 PITNSLEENI NKFDILIDFT NPKTTLKNLE ICAVAKKNII IGTTGFTQEE QKKIKLLSKK 130 140 150 160 170 180 IGIVQSSNYS IGINLMISLL EKTTQIIGKN TDIEIIEAHH NKKIDAPSGT SLEIGKKICK 190 200 210 220 230 240 TMNWDFSKQA IYERHSSMKS RANNEIGFSS IRAGNIVGEH KVLFANSGEH IEITHKAISR 250 260 270 SIFSKGAIQA AIWLFSKNYK NGLFNMNHIL NI

References

[1]

"Reductive genome evolution in Buchnera aphidicola." van Ham R.C.H.J., Kamerbeek J., Palacios C., Rausell C., Abascal F., Bastolla U., Fernandez J.M., Jimenez L., Postigo M., Silva F.J., Tamames J., Viguera E., Latorre A., Valencia A., Moran F., Moya A. Proc. Natl. Acad. Sci. U.S.A. 100:581-586(2003) [PubMed: 12522265] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE016826 Genomic DNA. Translation: AAO26870.1.
RefSeq	NP_777765.1.
3D structure databases
HSSP	HSSP built from PDB template 1DRU based on UniProtKB P04036.
ModBase	Search...
Genome annotation databases
GeneID	1058206.
GenomeReviews	Gene locus bbp_136 in contig AE016826_GR.
KEGG	bab:bbp136.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	P59474.
OMA	P59474. TIGFSTI.
Enzyme and pathway databases
BioCyc	BAPH224915:BBP_136-MON.
Family and domain databases
HAMAP	MF_00102. [Tree]
InterPro	IPR000846. DapB. IPR011770. DapB_bac/pln. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
PANTHER	PTHR20836. DapB_bac/pln. 1 hit.
Pfam	PF05173. DapB_C. 1 hit. PF01113. DapB_N. 1 hit. [Graphical view]
ProDom	PD004105. DapB. 1 hit. [Graphical view] [Entries sharing at least one domain]
TIGRFAMs	TIGR00036. dapB. 1 hit.
PROSITE	PS01298. DAPB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

DAPB_BUCBP

Accession

Primary (citable) accession number: P59474

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 28, 2003
Last sequence update:	March 28, 2003
Last modified:	June 16, 2009
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)