Reviewed, UniProtKB/Swiss-Prot P59392 (SELD_PSEPK)

Names and origin

Protein names

Recommended name:
    Selenide, water dikinase
    EC=2.7.9.3
Alternative name(s):
    Selenophosphate synthetase
    Selenium donor protein

Gene names

Name:	selD
Ordered Locus Names:	PP_0823

Organism

Pseudomonas putida (strain KT2440) [Complete proteome] [HAMAP]

Taxonomic identifier

160488 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas

Protein attributes

Sequence length	344 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Synthesizes selenophosphate from selenide and ATP By similarity.
Catalytic activity	ATP + selenide + H2O = AMP + selenophosphate + phosphate. HAMAP MF_00625
Cofactor	Magnesium By similarity.
Sequence similarities	Belongs to the selenophosphate synthetase 1 family. Class I subfamily.

Ontologies

Keywords
Ligand	ATP-binding Magnesium Nucleotide-binding Selenium
Molecular function	Kinase Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	ATP binding Inferred from electronic annotation. Source: HAMAP magnesium ion binding Inferred from electronic annotation. Source: HAMAP selenide, water dikinase activity Inferred from electronic annotation. Source: HAMAP selenium binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 344	344	Selenide, water dikinase HAMAP MF_00625		PRO_0000127634
Regions
	Nucleotide binding	229 – 235	7	ATP Potential
Sites
	Active site	16	1	Potential
	Site	19	1	Important for catalytic activity By similarity

Sequences

	Sequence		Length	Mass (Da)
	P59392-1 [UniParc]. Last modified March 25, 2003. Version 1. Checksum: 10DDA9E4CB4BEF00	FASTA	344	36,246
	10 20 30 40 50 60 MSEPIRLTQY SHGAGCGCKI SPKVLDVILA ESGTQALDPK LWVGNASRDD AAVYALDDER 70 80 90 100 110 120 GVVSTTDFFM PIVDDPYDFG RIAATNAISD IYAMGGDPLM AIAILGWPVN VLPPEVAREV 130 140 150 160 170 180 IRGGRAVCAE AGIPLAGGHS IDAPEPIFGL AVTGVVSKRH LKRNDTASAG CQLYLTKPLG 190 200 210 220 230 240 IGILTTAEKK AKLRVQDQGL ARDWMCTLNT PGSRFGKLDG VKAMTDVTGF GLLGHLVELA 250 260 270 280 290 300 EGSGLTAHLN YAAVPRLPSV DHYLAEGCIP GGTLRNYDSY GHKISALSDD QKHLLCDPQT 310 320 330 340 SGGLLVAVAP EGEAEFLAVA AELGLKLSPI GKLVERQSHA VEVI

References

[1]

"Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440." Nelson K.E., Weinel C., Paulsen I.T., Dodson R.J., Hilbert H., Martins dos Santos V.A.P., Fouts D.E., Gill S.R., Pop M., Holmes M., Brinkac L.M., Beanan M.J., DeBoy R.T., Daugherty S.C., Kolonay J.F., Madupu R., Nelson W.C., White O. , Peterson J.D., Khouri H.M., Hance I., Chris Lee P., Holtzapple E.K., Scanlan D., Tran K., Moazzez A., Utterback T.R., Rizzo M., Lee K., Kosack D., Moestl D., Wedler H., Lauber J., Stjepandic D., Hoheisel J., Straetz M., Heim S., Kiewitz C., Eisen J.A., Timmis K.N., Duesterhoeft A., Tuemmler B., Fraser C.M. Environ. Microbiol. 4:799-808(2002) [PubMed: 12534463] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBLGenBankDDBJ	AE015451 Genomic DNA. Translation: AAN66448.1.
RefSeq	NP_742984.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P59392.
Genome annotation databases
GeneID	1044679.
GenomeReviews	Gene locus PP_0823 in contig AE015451_GR.
KEGG	ppu:PP_0823.
NMPDR	fig|160488.1.peg.814.
TIGR	PP_0823.
Phylogenomic databases
HOGENOM	P59392.
OMA	GGRFACQ.
Enzyme and pathway databases
BioCyc	PPUT160488:PP_0823-MON.
Family and domain databases
HAMAP	MF_00625. [Tree]
InterPro	IPR000728. AIR_synth. IPR010918. AIR_synth_C. IPR004536. SelD. [Graphical view]
Pfam	PF00586. AIRS. 1 hit. PF02769. AIRS_C. 1 hit. [Graphical view]
PIRSF	PIRSF036407. Selenphspht_syn. 1 hit.
TIGRFAMs	TIGR00476. selD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

SELD_PSEPK

Accession

Primary (citable) accession number: P59392

Entry history

Integrated into UniProtKB/Swiss-Prot:	March 25, 2003
Last sequence update:	March 25, 2003
Last modified:	November 3, 2009
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)