Reviewed, UniProtKB/Swiss-Prot P59231 (R10A3_ARATH)

Names and origin

Protein names

Recommended name:
    60S ribosomal protein L10a-3

Gene names

Name:	RPL10AC
Ordered Locus Names:	At5g22440
ORF Names:	MWD9.24

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	217 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytosolic large ribosomal subunit Inferred from direct assay. Source: TAIR nucleolus Inferred from direct assay. Source: TAIR
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 217	217	60S ribosomal protein L10a-3		PRO_0000125834
Experimental info
	Sequence conflict	50	1	S → A in CAA23376. Ref.3

Sequences

	Sequence		Length	Mass (Da)
	P59231-1 [UniParc]. Last modified January 27, 2003. Version 1. Checksum: C72C49CCB6BAD320	FASTA	217	24,532
	10 20 30 40 50 60 MSKLQSEAVR EAISSIITHC KETKPRNFTE TIELQIGLKN YDPQKDKRFS GSVKLPHVPR 70 80 90 100 110 120 PKMKICMLGD AQHVEEAEKI GLESMDVEAL KKLNKNKKLV KKLAKKFHAF LASESVIKQI 130 140 150 160 170 180 PRLLGPGLNK AGKFPTLVSH QESLESKVNE TKATVKFQLK KVLCMGVAVG NLSMEEKQIF 190 200 210 QNVQMSVNFL VSLLKKNWQN VRCLYLKSTM GPPNRVF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Structural analysis of Arabidopsis thaliana chromosome 5. III. Sequence features of the regions of 1,191,918 bp covered by seventeen physically assigned P1 clones." Nakamura Y., Sato S., Kaneko T., Kotani H., Asamizu E., Miyajima N., Tabata S. DNA Res. 4:401-414(1997) [PubMed: 9501997] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[3]	"Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 non-redundant ESTs." Cooke R., Raynal M., Laudie M., Grellet F., Delseny M., Morris P.-C., Guerrier D., Giraudat J., Quigley F., Clabault G., Li Y.-F., Mache R., Krivitzky M., Gy I.J.-J., Kreis M., Lecharny A., Parmentier Y., Marbach J. , Fleck J., Clement B., Philipps G., Herve C., Bardet C., Tremousaygue D., Lescure B., Lacomme C., Roby D., Jourjon M.-F., Chabrier P., Charpenteau J.-L., Desprez T., Amselem J., Chiapello H., Hoefte H. Plant J. 9:101-124(1996) [PubMed: 8580968] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-78. Strain: cv. Columbia.
[4]	"The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome." Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R., Delseny M., Bailey-Serres J. Plant Physiol. 127:398-415(2001) [PubMed: 11598216] [Abstract] Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AB007651 Genomic DNA. Translation: BAB08343.1. AY037253 mRNA. Translation: AAK59854.1. AY077657 mRNA. Translation: AAL76135.1. F19997 mRNA. Translation: CAA23376.1.
IPI	IPI00536065.
RefSeq	NP_001078612.1. NP_197636.1.
UniGene	At.7367 Rra.747 Rsa.1763
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P59231.
Proteomic databases
PRIDE	P59231.
Genome annotation databases
GeneID	832305.
GenomeReviews	Gene locus AT5G22440 in contig BA000015_GR.
KEGG	ath:AT5G22440.
NMPDR	fig|3702.1.peg.24403.
Organism-specific databases
GeneFarm	211. 10.
TAIR	At5g22440.
Phylogenomic databases
HOGENOM	HBG316566.
InParanoid	P59231.
OMA	ITHCKET.
Gene expression databases
ArrayExpress	P59231.
Genevestigator	P59231.
GermOnline	AT5G22440. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR002143. Ribosomal_L1. IPR016094. Ribosomal_L1_2-a/b-sand. [Graphical view]
Gene3D	G3DSA:3.30.190.20. Ribosomal_L1_2-a/b-sand. 1 hit.
Pfam	PF00687. Ribosomal_L1. 1 hit. [Graphical view]
PIRSF	PIRSF002155. Ribosomal_L1. 1 hit.
PROSITE	PS01199. RIBOSOMAL_L1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

R10A3_ARATH

Accession

Primary (citable) accession number: P59231
Secondary accession number(s): P53029, Q9FMQ7

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 27, 2003
Last sequence update:	January 27, 2003
Last modified:	December 15, 2009
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)