Reviewed, UniProtKB/Swiss-Prot P59230 (R10A2_ARATH)

Names and origin

Protein names

Recommended name:
    60S ribosomal protein L10a-2

Gene names

Name:	RPL10AB
Ordered Locus Names:	At2g27530
ORF Names:	F15K20.37, F10A12.22

Organism

Arabidopsis thaliana (Mouse-ear cress) [Complete proteome]

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis

Protein attributes

Sequence length	216 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L1P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro adaxial/abaxial pattern formation Inferred from genetic interaction. Source: TAIR post-embryonic organ development Inferred from genetic interaction. Source: TAIR translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytosolic large ribosomal subunit Inferred from direct assay. Source: TAIR
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 216	216	60S ribosomal protein L10a-2		PRO_0000125833

Sequences

	Sequence		Length	Mass (Da)
	P59230-1 [UniParc]. Last modified January 27, 2003. Version 1. Checksum: 138F0D96FDB6FF26	FASTA	216	24,425
	10 20 30 40 50 60 MSKLQSEAVR EAITTIKGKS EEKKRNFVET VELQIGLKNY DPQKDKRFSG SVKLPHIPRP 70 80 90 100 110 120 KMKICMLGDA QHVEEAEKMG LSNMDVEALK KLNKNKKLVK KLAKSYHAFL ASESVIKQIP 130 140 150 160 170 180 RLLGPGLNKA GKFPTLVSHQ ESLEAKVNET KATVKFQLKK VLCMGVAVGN LSMEEKQLFQ 190 200 210 NVQMSVNFLV SLLKKNWQNV RCLYLKSTMG PPQRIF

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana." Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C. Nature 402:761-768(1999) [PubMed: 10617197] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[3]	"Further progress towards a catalogue of all Arabidopsis genes: analysis of a set of 5000 non-redundant ESTs." Cooke R., Raynal M., Laudie M., Grellet F., Delseny M., Morris P.-C., Guerrier D., Giraudat J., Quigley F., Clabault G., Li Y.-F., Mache R., Krivitzky M., Gy I.J.-J., Kreis M., Lecharny A., Parmentier Y., Marbach J. , Fleck J., Clement B., Philipps G., Herve C., Bardet C., Tremousaygue D., Lescure B., Lacomme C., Roby D., Jourjon M.-F., Chabrier P., Charpenteau J.-L., Desprez T., Amselem J., Chiapello H., Hoefte H. Plant J. 9:101-124(1996) [PubMed: 8580968] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 1-126. Strain: cv. Columbia. Tissue: Dry seed.
[4]	"The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome." Barakat A., Szick-Miranda K., Chang I.-F., Guyot R., Blanc G., Cooke R., Delseny M., Bailey-Serres J. Plant Physiol. 127:398-415(2001) [PubMed: 11598216] [Abstract] Cited for: GENE FAMILY ORGANIZATION, NOMENCLATURE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AC005824 Genomic DNA. Translation: AAC73045.2. AC006232 Genomic DNA. Translation: AAM15190.1. AF360146 mRNA. Translation: AAK25856.1. AY056371 mRNA. Translation: AAL07257.1. AY081263 mRNA. Translation: AAL91152.1. BT006262 mRNA. Translation: AAP13370.1. Z27264 mRNA. Translation: CAA81775.1.
IPI	IPI00541952.
PIR	A84674.
RefSeq	NP_565654.1. NP_850104.1.
UniGene	At.19006 Rra.4189 Rra.717 Rra.747 Rsa.1763 Rsa.22686 Rsa.2732 Rsa.6913
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	P59230.
Proteomic databases
PRIDE	P59230.
Genome annotation databases
GeneID	817299.
GenomeReviews	Gene locus AT2G27530 in contig CT485783_GR.
KEGG	ath:AT2G27530.
NMPDR	fig|3702.1.peg.9798.
Organism-specific databases
GeneFarm	212. 10.
TAIR	At2g27530.
Phylogenomic databases
HOGENOM	HBG316566.
InParanoid	P59230.
OMA	MEDEAIA.
Gene expression databases
ArrayExpress	P59230.
Genevestigator	P59230.
GermOnline	AT2G27530. Arabidopsis thaliana.
Family and domain databases
InterPro	IPR002143. Ribosomal_L1. IPR016094. Ribosomal_L1_2-a/b-sand. [Graphical view]
Gene3D	G3DSA:3.30.190.20. Ribosomal_L1_2-a/b-sand. 1 hit.
Pfam	PF00687. Ribosomal_L1. 1 hit. [Graphical view]
PIRSF	PIRSF002155. Ribosomal_L1. 1 hit.
PROSITE	PS01199. RIBOSOMAL_L1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

R10A2_ARATH

Accession

Primary (citable) accession number: P59230
Secondary accession number(s): P53029, Q9C5M4, Q9SLF8

Entry history

Integrated into UniProtKB/Swiss-Prot:	January 27, 2003
Last sequence update:	January 27, 2003
Last modified:	December 15, 2009
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)