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P59092 (CU094_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 52. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Putative uncharacterized protein encoded by LINC00314
Gene names
Name:LINC00314
Synonyms:C21orf94, NCRNA00314
OrganismHomo sapiens (Human)
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length62 AA.
Sequence statusComplete.
Protein existenceUncertain

General annotation (Comments)

Tissue specificity

Expressed in testis, prostate, fetal brain, brain, uterus, bone marrow, placenta, colon, fetal liver, thymus, salivary glands, spinal chord, muscle, trachea and adrenal gland. Not expressed in lung, small intestine, breast, heart, liver, kidney and spleen. Ref.1

Caution

Product of a dubious CDS prediction. May be a non-coding RNA.

Ontologies

Keywords
   Coding sequence diversityPolymorphism
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6262Putative uncharacterized protein encoded by LINC00314
PRO_0000079542

Natural variations

Natural variant491C → Y.
Corresponds to variant rs2831368 [ dbSNP | Ensembl ].
VAR_020098

Sequences

Sequence LengthMass (Da)Tools
P59092 [UniParc].

Last modified November 15, 2002. Version 1.
Checksum: 8877D5B333B9CA66

FASTA627,260
        10         20         30         40         50         60 
MLKIAVMEVS QSAWKTVWKE VAWPHCHVPL SLKKGHICLC ARQHIHLVCV YTLVYVFCYL 


TF 

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References

« Hide 'large scale' references
[1]"Nineteen additional unpredicted transcripts from human chromosome 21."
Reymond A., Camargo A.A., Deutsch S., Stevenson B.J., Parmigiani R.B., Ucla C., Bettoni F., Rossier C., Lyle R., Guipponi M., de Souza S., Iseli C., Jongeneel C.V., Bucher P., Simpson A.J.G., Antonarakis S.E.
Genomics 79:824-832(2002) [PubMed: 12036297] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY.
[2]"The DNA sequence of human chromosome 21."
Hattori M., Fujiyama A., Taylor T.D., Watanabe H., Yada T., Park H.-S., Toyoda A., Ishii K., Totoki Y., Choi D.-K., Groner Y., Soeda E., Ohki M., Takagi T., Sakaki Y., Taudien S., Blechschmidt K., Polley A. expand/collapse author list , Menzel U., Delabar J., Kumpf K., Lehmann R., Patterson D., Reichwald K., Rump A., Schillhabel M., Schudy A., Zimmermann W., Rosenthal A., Kudoh J., Shibuya K., Kawasaki K., Asakawa S., Shintani A., Sasaki T., Nagamine K., Mitsuyama S., Antonarakis S.E., Minoshima S., Shimizu N., Nordsiek G., Hornischer K., Brandt P., Scharfe M., Schoen O., Desario A., Reichelt J., Kauer G., Bloecker H., Ramser J., Beck A., Klages S., Hennig S., Riesselmann L., Dagand E., Wehrmeyer S., Borzym K., Gardiner K., Nizetic D., Francis F., Lehrach H., Reinhardt R., Yaspo M.-L.
Nature 405:311-319(2000) [PubMed: 10830953] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF427489 mRNA. Translation: AAM53528.1.
AJ006995 Genomic DNA. No translation available.
BC126226 mRNA. No translation available.
BC126230 mRNA. No translation available.
IPIIPI00171430.
UniGeneHs.505079.

3D structure databases

ModBaseSearch...

Proteomic databases

PRIDEP59092.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

HGNCHGNC:16622. LINC00314.
neXtProtNX_P59092.
GenAtlasSearch...

Phylogenomic databases

InParanoidP59092.

Gene expression databases

CleanExHS_C21orf94.
GenevestigatorP59092.
GermOnlineENSG00000178457. Homo sapiens.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameCU094_HUMAN
AccessionPrimary (citable) accession number: P59092
Secondary accession number(s): A0AV62
Entry history
Integrated into UniProtKB/Swiss-Prot: November 15, 2002
Last sequence update: November 15, 2002
Last modified: January 25, 2012
This is version 52 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Relevant documents

Human chromosome 21

Human chromosome 21: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations