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Protein

Putative charged multivesicular body protein 4B-like protein CHMP4BP1

Gene

CHMP4BP1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

GO - Biological processi

  1. vacuolar transport Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Putative charged multivesicular body protein 4B-like protein CHMP4BP1
Alternative name(s):
Charged multivesicular body protein 4B pseudogene 1
Gene namesi
ORF Names:CGI-301
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Unplaced

Organism-specific databases

HGNCiHGNC:43616. CHMP4BP1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 171171Putative charged multivesicular body protein 4B-like protein CHMP4BP1PRO_0000211523Add
BLAST

Proteomic databases

MaxQBiP59074.
PaxDbiP59074.
PRIDEiP59074.

Expressioni

Gene expression databases

GenevestigatoriP59074.

Structurei

3D structure databases

ProteinModelPortaliP59074.
SMRiP59074. Positions 1-57.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SNF7 family.Curated

Phylogenomic databases

eggNOGiNOG291419.
HOVERGENiHBG050928.
InParanoidiP59074.

Family and domain databases

InterProiIPR005024. Snf7_fam.
[Graphical view]
PfamiPF03357. Snf7. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P59074-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSKKQEFLE KKIEQRHGTK NKPAALQALK RKKRYEKQLA QIDGTLSTIE
60 70 80 90 100
FQQQALENAN TNTEVLKNMG SAAKAKKAAH DNMDIDKVDE LMQDIADQQE
110 120 130 140 150
LGEEISTAIS KPVGFGEKSD EDELMAELEE LEQEEPDKNL LEVSGPETVP
160 170
LPNVPSIALP SKPAKKRKTT T
Length:171
Mass (Da):19,069
Last modified:October 31, 2002 - v1
Checksum:i0DA13C49D5C02E66
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF531436 mRNA. Translation: AAM96689.1.
AL158801 Genomic DNA. No translation available.

Polymorphism databases

DMDMi24638418.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF531436 mRNA. Translation: AAM96689.1.
AL158801 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliP59074.
SMRiP59074. Positions 1-57.
ModBaseiSearch...
MobiDBiSearch...

Polymorphism databases

DMDMi24638418.

Proteomic databases

MaxQBiP59074.
PaxDbiP59074.
PRIDEiP59074.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GeneCardsiGC14P055767.
HGNCiHGNC:43616. CHMP4BP1.
neXtProtiNX_P59074.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG291419.
HOVERGENiHBG050928.
InParanoidiP59074.

Gene expression databases

GenevestigatoriP59074.

Family and domain databases

InterProiIPR005024. Snf7_fam.
[Graphical view]
PfamiPF03357. Snf7. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Ye J.J.
    Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [MRNA].
  2. "The DNA sequence and analysis of human chromosome 14."
    Heilig R., Eckenberg R., Petit J.-L., Fonknechten N., Da Silva C., Cattolico L., Levy M., Barbe V., De Berardinis V., Ureta-Vidal A., Pelletier E., Vico V., Anthouard V., Rowen L., Madan A., Qin S., Sun H., Du H.
    , Pepin K., Artiguenave F., Robert C., Cruaud C., Bruels T., Jaillon O., Friedlander L., Samson G., Brottier P., Cure S., Segurens B., Aniere F., Samain S., Crespeau H., Abbasi N., Aiach N., Boscus D., Dickhoff R., Dors M., Dubois I., Friedman C., Gouyvenoux M., James R., Madan A., Mairey-Estrada B., Mangenot S., Martins N., Menard M., Oztas S., Ratcliffe A., Shaffer T., Trask B., Vacherie B., Bellemere C., Belser C., Besnard-Gonnet M., Bartol-Mavel D., Boutard M., Briez-Silla S., Combette S., Dufosse-Laurent V., Ferron C., Lechaplais C., Louesse C., Muselet D., Magdelenat G., Pateau E., Petit E., Sirvain-Trukniewicz P., Trybou A., Vega-Czarny N., Bataille E., Bluet E., Bordelais I., Dubois M., Dumont C., Guerin T., Haffray S., Hammadi R., Muanga J., Pellouin V., Robert D., Wunderle E., Gauguet G., Roy A., Sainte-Marthe L., Verdier J., Verdier-Discala C., Hillier L.W., Fulton L., McPherson J., Matsuda F., Wilson R., Scarpelli C., Gyapay G., Wincker P., Saurin W., Quetier F., Waterston R., Hood L., Weissenbach J.
    Nature 421:601-607(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCHM4P_HUMAN
AccessioniPrimary (citable) accession number: P59074
Secondary accession number(s): Q8NFA9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: October 31, 2002
Last sequence update: October 31, 2002
Last modified: March 3, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 14
    Human chromosome 14: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.