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Protein

Adenylate dimethylallyltransferase

Gene

tzs

Organism
Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Transfers dimethylallyl groups to AMP as part of the biosynthesis of cytokinin phytohormones.1 Publication

Catalytic activityi

Dimethylallyl diphosphate + AMP = diphosphate + N(6)-(dimethylallyl)adenosine 5'-phosphate.1 Publication

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Keywords - Biological processi

Cytokinin biosynthesis

Enzyme and pathway databases

BioCyciAGRO:ATU6164-MONOMER.
BRENDAi2.5.1.27. 200.

Names & Taxonomyi

Protein namesi
Recommended name:
Adenylate dimethylallyltransferase (EC:2.5.1.27)
Alternative name(s):
Dimethylallyl transferase
Isopentenyl transferase
Trans-zeatin producing protein
Gene namesi
Name:tzs
Ordered Locus Names:Atu6164
ORF Names:AGR_pTi_290
Encoded oniPlasmid pTiC580 Publication
OrganismiAgrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium tumefaciens (strain C58))
Taxonomic identifieri176299 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupAgrobacteriumAgrobacterium tumefaciens complex
Proteomesi
  • UP000000813 Componenti: Plasmid Ti

Pathology & Biotechi

Keywords - Diseasei

Crown gall tumor

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002164411 – 243Adenylate dimethylallyltransferaseAdd BLAST243

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
virB5P177954EBI-6402098,EBI-6400510

Protein-protein interaction databases

IntActiP58758. 1 interactor.

Structurei

Secondary structure

1243
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi2 – 7Combined sources6
Beta strandi9 – 13Combined sources5
Helixi14 – 25Combined sources12
Beta strandi29 – 31Combined sources3
Helixi35 – 37Combined sources3
Helixi39 – 41Combined sources3
Turni42 – 46Combined sources5
Helixi50 – 53Combined sources4
Beta strandi57 – 59Combined sources3
Helixi66 – 68Combined sources3
Helixi73 – 85Combined sources13
Turni86 – 89Combined sources4
Beta strandi90 – 97Combined sources8
Helixi100 – 108Combined sources9
Turni110 – 113Combined sources4
Beta strandi117 – 122Combined sources6
Helixi128 – 143Combined sources16
Beta strandi147 – 149Combined sources3
Helixi152 – 160Combined sources9
Helixi165 – 169Combined sources5
Helixi175 – 184Combined sources10
Helixi189 – 194Combined sources6
Helixi199 – 221Combined sources23

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ZE5X-ray2.31A1-243[»]
2ZE6X-ray2.10A1-243[»]
2ZE7X-ray2.10A1-243[»]
2ZE8X-ray2.80A/B/C/D1-243[»]
ProteinModelPortaliP58758.
SMRiP58758.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP58758.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000060995.
OMAiRIAQEYW.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR002648. Tzs.
[Graphical view]
PfamiPF01745. IPT. 1 hit.
[Graphical view]
PIRSFiPIRSF000507. IPT. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.

Sequencei

Sequence statusi: Complete.

P58758-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLLHLIYGPT CSGKTDMAIQ IAQETGWPVV ALDRVQCCPQ IATGSGRPLE
60 70 80 90 100
SELQSTRRIY LDSRPLTEGI LDAESAHRRL IFEVDWRKSE EGLILEGGSI
110 120 130 140 150
SLLNCMAKSP FWRSGFQWHV KRLRLGDSDA FLTRAKQRVA EMFAIREDRP
160 170 180 190 200
SLLEELAELW NYPAARPILE DIDGYRCAIR FARKHDLAIS QLPNIDAGRH
210 220 230 240
VELIEAIANE YLEHALSQER DFPQWPEDGA GQPVCPVTLT RIR
Length:243
Mass (Da):27,591
Last modified:March 27, 2002 - v1
Checksum:i59D3743BA14B6AA5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X03933 Genomic DNA. Translation: CAA27572.1.
J03320 Genomic DNA. No translation available.
AE007871 Genomic DNA. Translation: AAK91123.2.
PIRiAB3248.
S03122.
RefSeqiNP_396682.2. NC_003065.3.
WP_010974913.1. NC_003065.3.

Genome annotation databases

EnsemblBacteriaiAAK91123; AAK91123; Atu6164.
GeneIDi1137487.
KEGGiatu:Atu6164.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
X03933 Genomic DNA. Translation: CAA27572.1.
J03320 Genomic DNA. No translation available.
AE007871 Genomic DNA. Translation: AAK91123.2.
PIRiAB3248.
S03122.
RefSeqiNP_396682.2. NC_003065.3.
WP_010974913.1. NC_003065.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2ZE5X-ray2.31A1-243[»]
2ZE6X-ray2.10A1-243[»]
2ZE7X-ray2.10A1-243[»]
2ZE8X-ray2.80A/B/C/D1-243[»]
ProteinModelPortaliP58758.
SMRiP58758.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP58758. 1 interactor.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAK91123; AAK91123; Atu6164.
GeneIDi1137487.
KEGGiatu:Atu6164.

Phylogenomic databases

HOGENOMiHOG000060995.
OMAiRIAQEYW.

Enzyme and pathway databases

BioCyciAGRO:ATU6164-MONOMER.
BRENDAi2.5.1.27. 200.

Miscellaneous databases

EvolutionaryTraceiP58758.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR002648. Tzs.
[Graphical view]
PfamiPF01745. IPT. 1 hit.
[Graphical view]
PIRSFiPIRSF000507. IPT. 1 hit.
SUPFAMiSSF52540. SSF52540. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiIPTZ_AGRFC
AccessioniPrimary (citable) accession number: P58758
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: March 27, 2002
Last modified: November 2, 2016
This is version 90 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Plasmid, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.