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P58686

- CI016_MOUSE

UniProt

P58686 - CI016_MOUSE

Protein

UPF0184 protein C9orf16 homolog

Gene
N/A
Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    UPF0184 protein C9orf16 homolog
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 2

    Organism-specific databases

    MGIiMGI:1920987. 1110008P14Rik.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 8383UPF0184 protein C9orf16 homologPRO_0000195162Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei82 – 821PhosphoserineBy similarity

    Keywords - PTMi

    Phosphoprotein

    Proteomic databases

    PRIDEiP58686.

    PTM databases

    PhosphoSiteiP58686.

    Expressioni

    Gene expression databases

    BgeeiP58686.
    CleanExiMM_1110008P14RIK.
    GenevestigatoriP58686.

    Family & Domainsi

    Coiled coil

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Coiled coili25 – 7450Sequence AnalysisAdd
    BLAST

    Sequence similaritiesi

    Belongs to the UPF0184 (EST00098) family.Curated

    Keywords - Domaini

    Coiled coil

    Phylogenomic databases

    eggNOGiNOG321577.
    GeneTreeiENSGT00390000001761.
    HOGENOMiHOG000231684.
    HOVERGENiHBG050958.
    InParanoidiP58686.
    OMAiNGDLGVP.
    OrthoDBiEOG7SV0ZQ.
    PhylomeDBiP58686.
    TreeFamiTF324640.

    Family and domain databases

    InterProiIPR022788. UPF0184.
    IPR005374. UPF0184_eukaryota.
    [Graphical view]
    PfamiPF03670. UPF0184. 1 hit.
    [Graphical view]
    ProDomiPD479232. UPF0184. 1 hit.
    [Graphical view] [Entries sharing at least one domain]

    Sequencei

    Sequence statusi: Complete.

    P58686-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSGPNGDLGM PVDAGTEGEN DSFGEAEYAA INSMLDQINS CLDHLEEKND   50
    HLHARLQELL ESNRQTRLEF QQQLGEAPGD ASP 83
    Length:83
    Mass (Da):9,055
    Last modified:January 31, 2002 - v1
    Checksum:i4D6D5BA98B72D36D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003598 mRNA. No translation available.
    BC024615 mRNA. Translation: AAH24615.1.
    BC049639 mRNA. Translation: AAH49639.1.
    CCDSiCCDS38103.1.
    RefSeqiNP_932118.1. NM_198001.2.
    UniGeneiMm.27608.

    Genome annotation databases

    EnsembliENSMUST00000048792; ENSMUSP00000038970; ENSMUSG00000039195.
    GeneIDi73737.
    KEGGimmu:73737.
    UCSCiuc008jfk.2. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AK003598 mRNA. No translation available.
    BC024615 mRNA. Translation: AAH24615.1 .
    BC049639 mRNA. Translation: AAH49639.1 .
    CCDSi CCDS38103.1.
    RefSeqi NP_932118.1. NM_198001.2.
    UniGenei Mm.27608.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    PTM databases

    PhosphoSitei P58686.

    Proteomic databases

    PRIDEi P58686.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000048792 ; ENSMUSP00000038970 ; ENSMUSG00000039195 .
    GeneIDi 73737.
    KEGGi mmu:73737.
    UCSCi uc008jfk.2. mouse.

    Organism-specific databases

    MGIi MGI:1920987. 1110008P14Rik.

    Phylogenomic databases

    eggNOGi NOG321577.
    GeneTreei ENSGT00390000001761.
    HOGENOMi HOG000231684.
    HOVERGENi HBG050958.
    InParanoidi P58686.
    OMAi NGDLGVP.
    OrthoDBi EOG7SV0ZQ.
    PhylomeDBi P58686.
    TreeFami TF324640.

    Miscellaneous databases

    NextBioi 338943.

    Gene expression databases

    Bgeei P58686.
    CleanExi MM_1110008P14RIK.
    Genevestigatori P58686.

    Family and domain databases

    InterProi IPR022788. UPF0184.
    IPR005374. UPF0184_eukaryota.
    [Graphical view ]
    Pfami PF03670. UPF0184. 1 hit.
    [Graphical view ]
    ProDomi PD479232. UPF0184. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    ProtoNeti Search...

    Publicationsi

    1. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Embryo.
    2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Brain and Mammary gland.

    Entry informationi

    Entry nameiCI016_MOUSE
    AccessioniPrimary (citable) accession number: P58686
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 31, 2002
    Last sequence update: January 31, 2002
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. SIMILARITY comments
      Index of protein domains and families
    3. Uncharacterized protein families (UPF)
      List of uncharacterized protein family (UPF) entries

    External Data

    Dasty 3