ID CAD23_RAT Reviewed; 3317 AA. AC P58365; DT 16-NOV-2001, integrated into UniProtKB/Swiss-Prot. DT 16-NOV-2001, sequence version 1. DT 27-MAR-2024, entry version 128. DE RecName: Full=Cadherin-23; DE AltName: Full=Otocadherin; DE Flags: Precursor; GN Name=Cdh23; OS Rattus norvegicus (Rat). OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; OC Murinae; Rattus. OX NCBI_TaxID=10116; RN [1] RP NUCLEOTIDE SEQUENCE [MRNA]. RC STRAIN=Sprague-Dawley; TISSUE=Testis; RX PubMed=11597768; DOI=10.1016/s0169-328x(01)00218-2; RA Nakajima D., Nakayama M., Kikuno R., Hirosawa M., Nagase T., Ohara O.; RT "Identification of three novel non-classical cadherin genes through RT comprehensive analysis of large cDNAs."; RL Brain Res. Mol. Brain Res. 94:85-95(2001). CC -!- FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They CC preferentially interact with themselves in a homophilic manner in CC connecting cells. CDH23 is required for establishing and/or maintaining CC the proper organization of the stereocilia bundle of hair cells in the CC cochlea and the vestibule during late embryonic/early postnatal CC development. It is part of the functional network formed by USH1C, CC USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear CC hair cells. Required for normal hearing. CC {ECO:0000250|UniProtKB:Q9H251}. CC -!- SUBUNIT: antiparallel heterodimer with PCDH15 (By similarity). CC Interacts with USH1C and USH1G (By similarity). CC {ECO:0000250|UniProtKB:Q99PF4, ECO:0000250|UniProtKB:Q9H251}. CC -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:Q9H251}; CC Single-pass type I membrane protein {ECO:0000255}. CC -!- DOMAIN: Three calcium ions are usually bound at the interface of each CC cadherin domain and rigidify the connections, imparting a strong CC curvature to the full-length ectodomain. CC {ECO:0000250|UniProtKB:P12830}. CC -!- DOMAIN: Cadherin repeats 1 and 2 mediate calcium-dependent heterophilic CC interaction with PCDH15. {ECO:0000250|UniProtKB:Q99PF4}. CC --------------------------------------------------------------------------- CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms CC Distributed under the Creative Commons Attribution (CC BY 4.0) License CC --------------------------------------------------------------------------- DR EMBL; AB053447; BAB61904.1; -; mRNA. DR RefSeq; NP_446096.1; NM_053644.1. DR SMR; P58365; -. DR STRING; 10116.ENSRNOP00000048338; -. DR GlyCosmos; P58365; 42 sites, No reported glycans. DR GlyGen; P58365; 42 sites. DR iPTMnet; P58365; -. DR PhosphoSitePlus; P58365; -. DR PaxDb; 10116-ENSRNOP00000048338; -. DR GeneID; 114102; -. DR KEGG; rno:114102; -. DR UCSC; RGD:619760; rat. DR AGR; RGD:619760; -. DR CTD; 64072; -. DR RGD; 619760; Cdh23. DR eggNOG; KOG3594; Eukaryota. DR InParanoid; P58365; -. DR OrthoDB; 2961370at2759; -. DR PhylomeDB; P58365; -. DR PRO; PR:P58365; -. DR Proteomes; UP000002494; Unplaced. DR GO; GO:0045177; C:apical part of cell; IDA:RGD. DR GO; GO:0005911; C:cell-cell junction; IBA:GO_Central. DR GO; GO:0005813; C:centrosome; ISO:RGD. DR GO; GO:0098683; C:cochlear hair cell ribbon synapse; ISO:RGD. DR GO; GO:0060091; C:kinocilium; ISO:RGD. DR GO; GO:0001917; C:photoreceptor inner segment; ISO:RGD. DR GO; GO:0098684; C:photoreceptor ribbon synapse; ISO:RGD. DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. DR GO; GO:0032420; C:stereocilium; ISO:RGD. DR GO; GO:0032426; C:stereocilium tip; ISO:RGD. DR GO; GO:0045202; C:synapse; ISO:RGD. DR GO; GO:0005509; F:calcium ion binding; IBA:GO_Central. DR GO; GO:0008344; P:adult locomotory behavior; ISO:RGD. DR GO; GO:0060088; P:auditory receptor cell stereocilium organization; ISO:RGD. DR GO; GO:0006816; P:calcium ion transport; ISO:RGD. DR GO; GO:0098609; P:cell-cell adhesion; IBA:GO_Central. DR GO; GO:0090102; P:cochlea development; ISO:RGD. DR GO; GO:0050957; P:equilibrioception; ISO:RGD. DR GO; GO:0007156; P:homophilic cell adhesion via plasma membrane adhesion molecules; IEA:InterPro. DR GO; GO:0042491; P:inner ear auditory receptor cell differentiation; ISO:RGD. DR GO; GO:0048839; P:inner ear development; ISO:RGD. DR GO; GO:0042472; P:inner ear morphogenesis; ISO:RGD. DR GO; GO:0060122; P:inner ear receptor cell stereocilium organization; ISO:RGD. DR GO; GO:0007626; P:locomotory behavior; ISO:RGD. DR GO; GO:0045494; P:photoreceptor cell maintenance; ISO:RGD. DR GO; GO:0051480; P:regulation of cytosolic calcium ion concentration; ISO:RGD. DR GO; GO:0060013; P:righting reflex; ISO:RGD. DR GO; GO:0050953; P:sensory perception of light stimulus; ISO:RGD. DR GO; GO:0007605; P:sensory perception of sound; ISO:RGD. DR CDD; cd11304; Cadherin_repeat; 27. DR Gene3D; 2.60.40.60; Cadherins; 27. DR InterPro; IPR039808; Cadherin. DR InterPro; IPR002126; Cadherin-like_dom. DR InterPro; IPR015919; Cadherin-like_sf. DR InterPro; IPR020894; Cadherin_CS. DR PANTHER; PTHR24027; CADHERIN-23; 1. DR PANTHER; PTHR24027:SF445; CADHERIN-87A; 1. DR Pfam; PF00028; Cadherin; 24. DR PRINTS; PR00205; CADHERIN. DR SMART; SM00112; CA; 26. DR SUPFAM; SSF49313; Cadherin-like; 27. DR PROSITE; PS00232; CADHERIN_1; 17. DR PROSITE; PS50268; CADHERIN_2; 27. PE 2: Evidence at transcript level; KW Calcium; Cell adhesion; Cell membrane; Glycoprotein; Hearing; Membrane; KW Metal-binding; Reference proteome; Repeat; Signal; Transmembrane; KW Transmembrane helix. FT SIGNAL 1..23 FT /evidence="ECO:0000255" FT CHAIN 24..3317 FT /note="Cadherin-23" FT /id="PRO_0000003826" FT TOPO_DOM 24..3062 FT /note="Extracellular" FT /evidence="ECO:0000255" FT TRANSMEM 3063..3083 FT /note="Helical" FT /evidence="ECO:0000255" FT TOPO_DOM 3084..3317 FT /note="Cytoplasmic" FT /evidence="ECO:0000255" FT DOMAIN 34..132 FT /note="Cadherin 1" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 133..236 FT /note="Cadherin 2" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 237..348 FT /note="Cadherin 3" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 349..458 FT /note="Cadherin 4" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 459..559 FT /note="Cadherin 5" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 560..669 FT /note="Cadherin 6" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 670..782 FT /note="Cadherin 7" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 777..888 FT /note="Cadherin 8" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 889..993 FT /note="Cadherin 9" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 994..1100 FT /note="Cadherin 10" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1101..1206 FT /note="Cadherin 11" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1208..1311 FT /note="Cadherin 12" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1312..1416 FT /note="Cadherin 13" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1418..1525 FT /note="Cadherin 14" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1527..1632 FT /note="Cadherin 15" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1633..1742 FT /note="Cadherin 16" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1743..1849 FT /note="Cadherin 17" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1850..1957 FT /note="Cadherin 18" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 1958..2067 FT /note="Cadherin 19" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2068..2172 FT /note="Cadherin 20" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2173..2291 FT /note="Cadherin 21" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2295..2400 FT /note="Cadherin 22" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2401..2507 FT /note="Cadherin 23" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2508..2609 FT /note="Cadherin 24" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2612..2720 FT /note="Cadherin 25" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2727..2844 FT /note="Cadherin 26" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT DOMAIN 2845..2973 FT /note="Cadherin 27" FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00043" FT CARBOHYD 155 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 206 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 349 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 391 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 432 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 464 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 470 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 600 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 692 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 763 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 808 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 825 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 939 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 999 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1016 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1169 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1280 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1313 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1471 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1532 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1649 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1665 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1816 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1855 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1887 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 1900 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2012 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2048 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2127 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2166 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2193 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2261 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2355 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2367 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2576 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2614 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2747 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2806 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2875 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2894 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2939 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" FT CARBOHYD 2979 FT /note="N-linked (GlcNAc...) asparagine" FT /evidence="ECO:0000255" SQ SEQUENCE 3317 AA; 365455 MW; CEF397A066BF0986 CRC64; MRHPPVTWCA MLWLLMLVSG SWGQVNRLPF FTNHFFDTYL LISEDTPVGS SVTQLLARDM DNDPLVFGVS GEEASRFFAV EPDTGVVWLR QPLDRETKSE FTVEFSVSDH QGVITRKVNI QVGDVNDNAP TFHNQPYSVR IPENTPVGTP IFIVNATDPD LGAGGSVLYS FQPPSQFFAI DSARGIVTVI RELDYEVTQA YQLTVNATDQ DKTRPLSTLA NLAIIITDVQ DMDPIFINLP YSTNIYEHSP PGTTVRVITA VDQDKGRPRG IGYTIVSGNT NSIFALDYIS GALTLNGLLD RENPLYSHGF ILTVKGTELN DDRSPSDATV TTTFNILVID INDNAPEFNS SEYSVAITEL AQVGFALPLF IQVVDKDEGL NSMFEVYLVG NNSHHFIISP TSVQGKADIR IRVAIPLDYE TVDRYDFDLF ANESVPDHVG YAKVKITLIN ENDNRPIFSQ PLYNVSLYEN ITVGTSVLTV LATDNDVGTF GEVNYFFSDD PDRFSLDKDT GLIMLIARLD YELIQRFTLT VIARDGGGEE TTGRVRINVL DVNDNVPTFQ KDAYVGALRE NEPSVTQLVR LRATDEDSPP NNLITYSIVN ASAFGSYFDI SVYEGYGVIS VSRPLDYEQI PNGLIYLTVM AKDAGNPPLY STVPVTIEVF DENDNPPTFS KPAYFVSVVE NIMAGATVLF LNATDLDRSR EYGQESIIYS LEGSSQFRIN ARSGEITTTS LLDRETKAEY ILIVRAVDGG VGHNQKTGIA TVNVTLLDIN DNHPTWKDAP YYINLVEMTP PDSDVTTVVA VDPDLGKNGT LVYSIQPPNK FYSLNSTTGK IRTTHVMLDR ENPDPVEAEL MRKIIVSVTD CGRPPLKATS SATVFVNLLD LNDNDPTFQN LPFVAEVLEG TPAGVSVYQV VAIDLDEGLN GLVSYRMQVG MPRMDFVINS TSGVVTTTAE LDRERIAEYQ LRVVASDAGT PTKSSTSTLT IRVLDVNDET PTFFPAVYNV SVSEDVPREF RVVWLNCTDN DVGLNAELSY FITAGNVDGK FSVGYRDAVV RTVVGLDRET TAAYTLVLEA IDNVPVGKRR TGTATVFVTV LDVNDNRPIF LQSSYEASVP EDIPEGHSIV QLKATDADEG EFGRVWYRIL HGNHGNNFRL HVSSGLLVRG PRPLDRERNS SHVLMAEAYN HDLGPMRSSV RVIVYVEDVN DEAPVFTQQQ YNRLGLRETA GIGTSVIVVR ATDRDTGDGG LVNYRILSGA EGKFEIDEST GLIVTVDYLD YETKTSYLMN VSATDGAPPF NQGFCSVYVT LLNELDEAVQ FSNASYEAVI MENLALGTEI VRVQAYSIDN LNQITYRFDA YTSAQAKALF KIDAITGVIT VKGLVDREKG DFYTLTVVAD DGGPKVDSTV KVYVTVLDEN DNSPRFDFTS DSAISVPEDC PVGQRVATVK ARDPDAGSNG QVVFSLASGN IAGAFEIITS NDSIGEVFVA KPLDREELDH YILKIVASDR GTPPRKKDHI LQVTILDVND NPPVIESPFG YNVSVNENVG GGTSVVQVRA TDRDIGINSV LSYYITEGNE DMTFRMDRIS GEIATRPAPP DRERQNFYHL VVTVEDEGTP TLSATTHVYV TIVDENDNAP VFQQPHYEVV LDEGPDTVNT SLITVQALDL DEGPNGTVTY AIVAGNIINT FRINRRTGVI TAAKELDYEI SHGRYTLIVT ATDQCPILSH RLTSTTTVLV NVNDINDNVP TFPRDYEGPF DVTEGQPGPR VWTFLAHDRD SGPNGQVEYS VVDGDPLGEF VISPVEGVLR VRKDVELDRE TIAFYNLTIC ARDRGVPPLS STMLVGIRVL DINDNDPVLL NLPMNITISE NSPVSSFVAH VLASDADSGC NALLTFNITA GNRERAFFIN ATTGIVTVNR PLDRERIPEY RLTVSVKDNP ENPRIARKDF DLLLVSLADE NDNHPLFTEG TYQAEVMENS PAGTPLTVLN GPILALDADE DVYAVVTYQL LGTHSDLFVI DNSTGVVTVR SGVIIDREAF SPPFLELLLL AEDVGQLNGT AYLFITILDD NDNWPTFSPP AYTVHLLENC PPGFSVLQIT ATDEDSGLNG ELVYRIEAGA QDRFLIHPVT GVIRVGNATI DREEQESYRL TVVATDRGTV PLSGTATVTI LIDDINDSRP EFLNPIQTVS VLESTEPGTV IANVTAIDLD LNPKLEYHIL SIVAKDDTDR LVPDQEDAFA VNINTGSVIV KSPLNRELVA TYEVTLSVID NASDLPERSV SVPNAKLTVN ILDVNDNTPQ FKPFGITYYT ERVLEGATPG TTLIAVAAVD PDKGLNGLIT YTLLDLIPPG YVQLEDSSAG KVIANRTVDY EEVHWLNFTV RASDNGSPPR AAEIPVYLEI VDINDNNPIF DQLSYQEAVF EDVAVGTVIL RVTATDADSG NFALIEYSLV DGEGKFAINP NTGDIYVLSS LDREKKDHYI LTALAKDNPG DVASNRRENS VQVVIRVLDV NDCRPQFSKP QFSTSVYENE PAGTSVITML ATDQDEGSNG QLTYSLEGPG MEAFSVDMDS GLVTTQRPLQ SYERFNLTVV ATDGGEPPLW GTTMLLVEVI DVNDNRPVFV RPPNGTILHI KEEIPLRSNV YEVYATDKDE GLNGAVRYSF LKSTGNRDWE YFTIDPISGL IQTAQRLDRE KQAVYSLILV ASDLGQPVPY ETMQPLQVAL EDIDDNEPLF VRPPKGSPQY QLLTVPEHSP RGTLVGNVTG AVDADEGPNA IVYYFIAAGN EDKNFHLQPD GRLLVLRDLD RETEAIFSFI VKASSNRSWT PPRGPSPALD LLTDLTLQEV RVVLEDINDQ PPRFTKAEYT AGVATDAKVG SELIQVLALD ADIGNNSLVF YGILAIHYFR ALANDSEDVG QVFTMGSVDG ILRTFDLFMA YSPGYFVVDI VARDLAGHND TAIIGIYILR DDQRVKIVIN EIPDRVRGFE EEFIRLLSNI TGAIVNTDDV QFHVDMKGRV NFAQTELLIH VVNRDTNRIL DVDRVIQMID ENKEQLRNLF RNYNVLDVQP AISVQLPDDM SALQMAIIVL AILLFLAAML FVLMNWYYRT IHKRKLKAIV AGSAGNRGFI DIMDMPNTNK YSFDGANPVW LDPFCRNLEL AAQAEHEDDL PENLSEIADL WNSPTRTHGT FGREPAAVKP EDDRYLRAAI QEYDNIAKLG QIIREGPIKL IHTDLEEEPG DHSPGQGSLR FRHKPPTELK GPDGIHIVHG STGTLLATDL NSLPEDDQKG LDRSLETLTA SEATAFERNA RTESAKSTPL HKLRDVIMES PLEITEL //