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P58349

- RBS_RHIME

UniProt

P58349 - RBS_RHIME

Protein

Ribulose bisphosphate carboxylase small chain

Gene

cbbS

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
  1. Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity.By similarity

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.

    GO - Molecular functioni

    1. monooxygenase activity Source: UniProtKB-KW
    2. ribulose-bisphosphate carboxylase activity Source: UniProtKB-EC

    GO - Biological processi

    1. reductive pentose-phosphate cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    Lyase, Monooxygenase, Oxidoreductase

    Keywords - Biological processi

    Calvin cycle, Carbon dioxide fixation

    Enzyme and pathway databases

    BioCyciSMEL266834:GJF6-3623-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase small chain (EC:4.1.1.39)
    Short name:
    RuBisCO small subunit
    Gene namesi
    Name:cbbS
    Ordered Locus Names:RB0190
    ORF Names:SMb20197
    Encoded oniPlasmid pSymB (megaplasmid 2)0 Publication
    OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
    Taxonomic identifieri266834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001976: Plasmid pSymB

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 129129Ribulose bisphosphate carboxylase small chainPRO_0000198619Add
    BLAST

    Interactioni

    Subunit structurei

    8 large chains + 8 small chains.

    Protein-protein interaction databases

    STRINGi266834.SM_b20197.

    Structurei

    3D structure databases

    ProteinModelPortaliP58349.
    SMRiP58349. Positions 1-127.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO small chain family.Curated

    Phylogenomic databases

    eggNOGiCOG4451.
    KOiK01602.
    OMAiMFDLKDA.
    OrthoDBiEOG6RC3Q7.

    Family and domain databases

    Gene3Di3.30.190.10. 1 hit.
    InterProiIPR000894. RuBisCO_sc_dom.
    [Graphical view]
    PfamiPF00101. RuBisCO_small. 1 hit.
    [Graphical view]
    SMARTiSM00961. RuBisCO_small. 1 hit.
    [Graphical view]
    SUPFAMiSSF55239. SSF55239. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P58349-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRITQGCFSF LPDLTDEQIT AQVQYCLGKG WAIGVEYTDD PHPRNTYWEM    50
    WGNPMFDLKD AKGVMMELED CRKAHPQDYI RLNAFDSSRG LETVTMSFIV 100
    NRPENEPSLR MTRTESNGRS QHYMWETQR 129
    Length:129
    Mass (Da):15,147
    Last modified:November 16, 2001 - v1
    Checksum:iB3A4DF100179F3FE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591985 Genomic DNA. Translation: CAC48590.1.
    PIRiF95865.
    RefSeqiNP_436730.1. NC_003078.1.
    WP_010975099.1. NC_003078.1.

    Genome annotation databases

    EnsemblBacteriaiCAC48590; CAC48590; SM_b20197.
    GeneIDi1236521.
    KEGGisme:SM_b20197.
    PATRICi23636769. VBISinMel96828_5106.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591985 Genomic DNA. Translation: CAC48590.1 .
    PIRi F95865.
    RefSeqi NP_436730.1. NC_003078.1.
    WP_010975099.1. NC_003078.1.

    3D structure databases

    ProteinModelPortali P58349.
    SMRi P58349. Positions 1-127.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266834.SM_b20197.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAC48590 ; CAC48590 ; SM_b20197 .
    GeneIDi 1236521.
    KEGGi sme:SM_b20197.
    PATRICi 23636769. VBISinMel96828_5106.

    Phylogenomic databases

    eggNOGi COG4451.
    KOi K01602.
    OMAi MFDLKDA.
    OrthoDBi EOG6RC3Q7.

    Enzyme and pathway databases

    BioCyci SMEL266834:GJF6-3623-MONOMER.

    Family and domain databases

    Gene3Di 3.30.190.10. 1 hit.
    InterProi IPR000894. RuBisCO_sc_dom.
    [Graphical view ]
    Pfami PF00101. RuBisCO_small. 1 hit.
    [Graphical view ]
    SMARTi SM00961. RuBisCO_small. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55239. SSF55239. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti."
      Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorhoelter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puehler A.
      Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021.

    Entry informationi

    Entry nameiRBS_RHIME
    AccessioniPrimary (citable) accession number: P58349
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 16, 2001
    Last sequence update: November 16, 2001
    Last modified: October 1, 2014
    This is version 80 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3