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P58063

- TRUB_CAUCR

UniProt

P58063 - TRUB_CAUCR

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Protein

tRNA pseudouridine synthase B

Gene

truB

Organism
Caulobacter crescentus (strain ATCC 19089 / CB15)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei47 – 471NucleophileUniRule annotation

GO - Molecular functioni

  1. pseudouridine synthase activity Source: UniProtKB-HAMAP
  2. RNA binding Source: InterPro

GO - Biological processi

  1. tRNA pseudouridine synthesis Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciCAULO:CC0036-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase BUniRule annotation (EC:5.4.99.25UniRule annotation)
Alternative name(s):
tRNA pseudouridine(55) synthaseUniRule annotation
Short name:
Psi55 synthaseUniRule annotation
tRNA pseudouridylate synthaseUniRule annotation
tRNA-uridine isomeraseUniRule annotation
Gene namesi
Name:truBUniRule annotation
Ordered Locus Names:CC_0036
OrganismiCaulobacter crescentus (strain ATCC 19089 / CB15)
Taxonomic identifieri190650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
ProteomesiUP000001816: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 310310tRNA pseudouridine synthase BPRO_0000121814Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP58063.
SMRiP58063. Positions 10-293.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0130.
HOGENOMiHOG000231225.
KOiK03177.
OMAiYELQFIR.
OrthoDBiEOG6358D3.

Family and domain databases

HAMAPiMF_01080. TruB_bact.
InterProiIPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view]
PANTHERiPTHR13767. PTHR13767. 1 hit.
PfamiPF01509. TruB_N. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00431. TruB. 1 hit.

Sequencei

Sequence statusi: Complete.

P58063-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARRKKGDAV SGWLCLDKPY DLTSTTAVSR VRRAFNAQKG GHAGTLDPLA
60 70 80 90 100
TGILPIALGE ATKTVPFLMD ADKAYRFTIA WGRDTTTLDR EGETTGTSDV
110 120 130 140 150
RPTREQVEAA LPAFIGEVDQ IPPNFSAIKV DGERAYDLAR DGVEFELPTR
160 170 180 190 200
KVSIFDLKVV DQPDADHVTL TMECGKGTYV RAVVRDLAKA LGTCGHVADL
210 220 230 240 250
RRTRVGGFSE ASAIALETLE NLSYEARLSE ALLPVETALD DIPALAVTDE
260 270 280 290 300
DAFRLAQGRA IVLLPRQVET LKAELPPGDR TVSAMSGDRL VALCEMRAGK
310
LNPVRVFQLT
Length:310
Mass (Da):33,596
Last modified:May 4, 2001 - v1
Checksum:i42491C54EFF328FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK22024.1.
PIRiD87253.
RefSeqiNP_418856.1. NC_002696.2.

Genome annotation databases

EnsemblBacteriaiAAK22024; AAK22024; CC_0036.
GeneIDi944095.
KEGGiccr:CC_0036.
PATRICi21296992. VBICauCre124313_0036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK22024.1 .
PIRi D87253.
RefSeqi NP_418856.1. NC_002696.2.

3D structure databases

ProteinModelPortali P58063.
SMRi P58063. Positions 10-293.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK22024 ; AAK22024 ; CC_0036 .
GeneIDi 944095.
KEGGi ccr:CC_0036.
PATRICi 21296992. VBICauCre124313_0036.

Phylogenomic databases

eggNOGi COG0130.
HOGENOMi HOG000231225.
KOi K03177.
OMAi YELQFIR.
OrthoDBi EOG6358D3.

Enzyme and pathway databases

BioCyci CAULO:CC0036-MONOMER.

Family and domain databases

HAMAPi MF_01080. TruB_bact.
InterProi IPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view ]
PANTHERi PTHR13767. PTHR13767. 1 hit.
Pfami PF01509. TruB_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00431. TruB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19089 / CB15.

Entry informationi

Entry nameiTRUB_CAUCR
AccessioniPrimary (citable) accession number: P58063
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 4, 2001
Last sequence update: May 4, 2001
Last modified: October 29, 2014
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3