SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

P58063

- TRUB_CAUCR

UniProt

P58063 - TRUB_CAUCR

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

tRNA pseudouridine synthase B

Gene
truB, CC_0036
Organism
Caulobacter crescentus (strain ATCC 19089 / CB15)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs By similarity.UniRule annotation

Catalytic activityi

tRNA uridine(55) = tRNA pseudouridine(55).UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei47 – 471Nucleophile By similarity

GO - Molecular functioni

  1. pseudouridine synthase activity Source: UniProtKB-HAMAP
  2. RNA binding Source: InterPro

GO - Biological processi

  1. tRNA pseudouridine synthesis Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Isomerase

Keywords - Biological processi

tRNA processing

Enzyme and pathway databases

BioCyciCAULO:CC0036-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
tRNA pseudouridine synthase B (EC:5.4.99.25)
Alternative name(s):
tRNA pseudouridine(55) synthase
Short name:
Psi55 synthase
tRNA pseudouridylate synthase
tRNA-uridine isomerase
Gene namesi
Name:truB
Ordered Locus Names:CC_0036
OrganismiCaulobacter crescentus (strain ATCC 19089 / CB15)
Taxonomic identifieri190650 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaCaulobacteralesCaulobacteraceaeCaulobacter
ProteomesiUP000001816: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 310310tRNA pseudouridine synthase BUniRule annotationPRO_0000121814Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP58063.
SMRiP58063. Positions 10-293.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0130.
HOGENOMiHOG000231225.
KOiK03177.
OMAiYELQFIR.
OrthoDBiEOG6358D3.

Family and domain databases

HAMAPiMF_01080. TruB_bact.
InterProiIPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view]
PANTHERiPTHR13767. PTHR13767. 1 hit.
PfamiPF01509. TruB_N. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
TIGRFAMsiTIGR00431. TruB. 1 hit.

Sequencei

Sequence statusi: Complete.

P58063-1 [UniParc]FASTAAdd to Basket

« Hide

MARRKKGDAV SGWLCLDKPY DLTSTTAVSR VRRAFNAQKG GHAGTLDPLA    50
TGILPIALGE ATKTVPFLMD ADKAYRFTIA WGRDTTTLDR EGETTGTSDV 100
RPTREQVEAA LPAFIGEVDQ IPPNFSAIKV DGERAYDLAR DGVEFELPTR 150
KVSIFDLKVV DQPDADHVTL TMECGKGTYV RAVVRDLAKA LGTCGHVADL 200
RRTRVGGFSE ASAIALETLE NLSYEARLSE ALLPVETALD DIPALAVTDE 250
DAFRLAQGRA IVLLPRQVET LKAELPPGDR TVSAMSGDRL VALCEMRAGK 300
LNPVRVFQLT 310
Length:310
Mass (Da):33,596
Last modified:May 4, 2001 - v1
Checksum:i42491C54EFF328FE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK22024.1.
PIRiD87253.
RefSeqiNP_418856.1. NC_002696.2.
WP_010917926.1. NC_002696.2.

Genome annotation databases

EnsemblBacteriaiAAK22024; AAK22024; CC_0036.
GeneIDi944095.
KEGGiccr:CC_0036.
PATRICi21296992. VBICauCre124313_0036.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE005673 Genomic DNA. Translation: AAK22024.1 .
PIRi D87253.
RefSeqi NP_418856.1. NC_002696.2.
WP_010917926.1. NC_002696.2.

3D structure databases

ProteinModelPortali P58063.
SMRi P58063. Positions 10-293.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK22024 ; AAK22024 ; CC_0036 .
GeneIDi 944095.
KEGGi ccr:CC_0036.
PATRICi 21296992. VBICauCre124313_0036.

Phylogenomic databases

eggNOGi COG0130.
HOGENOMi HOG000231225.
KOi K03177.
OMAi YELQFIR.
OrthoDBi EOG6358D3.

Enzyme and pathway databases

BioCyci CAULO:CC0036-MONOMER.

Family and domain databases

HAMAPi MF_01080. TruB_bact.
InterProi IPR002501. PsdUridine_synth.
IPR020103. PsdUridine_synth_cat_dom.
IPR014780. tRNA_psdUridine_synth_TruB.
[Graphical view ]
PANTHERi PTHR13767. PTHR13767. 1 hit.
Pfami PF01509. TruB_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
TIGRFAMsi TIGR00431. TruB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 19089 / CB15.

Entry informationi

Entry nameiTRUB_CAUCR
AccessioniPrimary (citable) accession number: P58063
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 4, 2001
Last sequence update: May 4, 2001
Last modified: September 3, 2014
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi