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P58059

- RT21_MOUSE

UniProt

P58059 - RT21_MOUSE

Protein

28S ribosomal protein S21, mitochondrial

Gene

Mrps21

Organism
Mus musculus (Mouse)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    28S ribosomal protein S21, mitochondrial
    Short name:
    MRP-S21
    Short name:
    S21mt
    Gene namesi
    Name:Mrps21
    Synonyms:Rpms21
    OrganismiMus musculus (Mouse)
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 3

    Organism-specific databases

    MGIiMGI:1913542. Mrps21.

    Subcellular locationi

    GO - Cellular componenti

    1. mitochondrial inner membrane Source: MGI
    2. mitochondrion Source: MGI
    3. ribosome Source: UniProtKB-KW

    Keywords - Cellular componenti

    Mitochondrion

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 878728S ribosomal protein S21, mitochondrialPRO_0000178414Add
    BLAST

    Proteomic databases

    PaxDbiP58059.
    PRIDEiP58059.

    PTM databases

    PhosphoSiteiP58059.

    Expressioni

    Gene expression databases

    ArrayExpressiP58059.
    BgeeiP58059.
    CleanExiMM_MRPS21.
    GenevestigatoriP58059.

    Interactioni

    Subunit structurei

    Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

    Protein-protein interaction databases

    BioGridi211361. 7 interactions.
    STRINGi10090.ENSMUSP00000066990.

    Structurei

    3D structure databases

    ProteinModelPortaliP58059.
    SMRiP58059. Positions 12-60.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S21P family.Curated

    Phylogenomic databases

    eggNOGiNOG47836.
    HOGENOMiHOG000007789.
    HOVERGENiHBG047411.
    InParanoidiP58059.
    KOiK02970.
    OMAiDMNRKIQ.
    OrthoDBiEOG7W9RX2.
    PhylomeDBiP58059.
    TreeFamiTF313903.

    Family and domain databases

    InterProiIPR001911. Ribosomal_S21.
    [Graphical view]
    PfamiPF01165. Ribosomal_S21. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00030. S21p. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P58059-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKHLKFIAR TVMVQEGNVE GAYRTLNRIL TTDGLTEVIS RRRYYEKPCR   50
    RRQRESYETC RRIYNMEMAR KINFLMRKNR ADPWLGC 87
    Length:87
    Mass (Da):10,561
    Last modified:May 4, 2001 - v1
    Checksum:iD0F4DAF886AA29DB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB049956 mRNA. Translation: BAB41009.1.
    AK002588 mRNA. Translation: BAC24999.1.
    AK003462 mRNA. Translation: BAC25036.1.
    AK003602 mRNA. Translation: BAC25044.1.
    AK007662 mRNA. Translation: BAC25181.1.
    AK007838 mRNA. Translation: BAC25189.1.
    AK008265 mRNA. Translation: BAC25210.1.
    AK008293 mRNA. Translation: BAC25213.1.
    AK009049 mRNA. Translation: BAC25237.1.
    AK009703 mRNA. Translation: BAC25267.1.
    BC027546 mRNA. Translation: AAH27546.1.
    CCDSiCCDS38550.1.
    RefSeqiNP_510964.1. NM_078479.3.
    XP_006501942.1. XM_006501879.1.
    UniGeneiMm.24108.

    Genome annotation databases

    EnsembliENSMUST00000067298; ENSMUSP00000066990; ENSMUSG00000054312.
    ENSMUST00000072587; ENSMUSP00000130403; ENSMUSG00000054312.
    GeneIDi66292.
    KEGGimmu:66292.
    UCSCiuc008qli.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB049956 mRNA. Translation: BAB41009.1 .
    AK002588 mRNA. Translation: BAC24999.1 .
    AK003462 mRNA. Translation: BAC25036.1 .
    AK003602 mRNA. Translation: BAC25044.1 .
    AK007662 mRNA. Translation: BAC25181.1 .
    AK007838 mRNA. Translation: BAC25189.1 .
    AK008265 mRNA. Translation: BAC25210.1 .
    AK008293 mRNA. Translation: BAC25213.1 .
    AK009049 mRNA. Translation: BAC25237.1 .
    AK009703 mRNA. Translation: BAC25267.1 .
    BC027546 mRNA. Translation: AAH27546.1 .
    CCDSi CCDS38550.1.
    RefSeqi NP_510964.1. NM_078479.3.
    XP_006501942.1. XM_006501879.1.
    UniGenei Mm.24108.

    3D structure databases

    ProteinModelPortali P58059.
    SMRi P58059. Positions 12-60.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    BioGridi 211361. 7 interactions.
    STRINGi 10090.ENSMUSP00000066990.

    PTM databases

    PhosphoSitei P58059.

    Proteomic databases

    PaxDbi P58059.
    PRIDEi P58059.

    Protocols and materials databases

    DNASUi 66292.
    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000067298 ; ENSMUSP00000066990 ; ENSMUSG00000054312 .
    ENSMUST00000072587 ; ENSMUSP00000130403 ; ENSMUSG00000054312 .
    GeneIDi 66292.
    KEGGi mmu:66292.
    UCSCi uc008qli.1. mouse.

    Organism-specific databases

    CTDi 54460.
    MGIi MGI:1913542. Mrps21.

    Phylogenomic databases

    eggNOGi NOG47836.
    HOGENOMi HOG000007789.
    HOVERGENi HBG047411.
    InParanoidi P58059.
    KOi K02970.
    OMAi DMNRKIQ.
    OrthoDBi EOG7W9RX2.
    PhylomeDBi P58059.
    TreeFami TF313903.

    Miscellaneous databases

    NextBioi 321225.
    PROi P58059.
    SOURCEi Search...

    Gene expression databases

    ArrayExpressi P58059.
    Bgeei P58059.
    CleanExi MM_MRPS21.
    Genevestigatori P58059.

    Family and domain databases

    InterProi IPR001911. Ribosomal_S21.
    [Graphical view ]
    Pfami PF01165. Ribosomal_S21. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00030. S21p. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Proteomic analysis of the mammalian mitochondrial ribosome. Identification of protein components in the 28S small subunit."
      Suzuki T., Terasaki M., Takemoto-Hori C., Hanada T., Ueda T., Wada A., Watanabe K.
      J. Biol. Chem. 276:33181-33195(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [MRNA].
    2. "The transcriptional landscape of the mammalian genome."
      Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.
      , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
      Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: C57BL/6J.
      Tissue: Kidney, Pancreas, Small intestine and Tongue.
    3. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Mammary gland.

    Entry informationi

    Entry nameiRT21_MOUSE
    AccessioniPrimary (citable) accession number: P58059
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 4, 2001
    Last sequence update: May 4, 2001
    Last modified: October 1, 2014
    This is version 95 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. MGD cross-references
      Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3