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P58059 (RT21_MOUSE) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 93. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
28S ribosomal protein S21, mitochondrial

Short name=MRP-S21
Short name=S21mt
Gene names
Name:Mrps21
Synonyms:Rpms21
OrganismMus musculus (Mouse) [Reference proteome]
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length87 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Subunit structure

Component of the mitochondrial ribosome small subunit (28S) which comprises a 12S rRNA and about 30 distinct proteins.

Subcellular location

Mitochondrion.

Sequence similarities

Belongs to the ribosomal protein S21P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 878728S ribosomal protein S21, mitochondrial
PRO_0000178414

Sequences

Sequence LengthMass (Da)Tools
P58059 [UniParc].

Last modified May 4, 2001. Version 1.
Checksum: D0F4DAF886AA29DB

FASTA8710,561
        10         20         30         40         50         60 
MAKHLKFIAR TVMVQEGNVE GAYRTLNRIL TTDGLTEVIS RRRYYEKPCR RRQRESYETC 

        70         80 
RRIYNMEMAR KINFLMRKNR ADPWLGC 

« Hide

References

« Hide 'large scale' references
[1]"Proteomic analysis of the mammalian mitochondrial ribosome. Identification of protein components in the 28S small subunit."
Suzuki T., Terasaki M., Takemoto-Hori C., Hanada T., Ueda T., Wada A., Watanabe K.
J. Biol. Chem. 276:33181-33195(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
[2]"The transcriptional landscape of the mammalian genome."
Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N., Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K., Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J. expand/collapse author list , Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R., Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T., Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A., Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B., Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M., Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S., Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E., Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D., Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M., Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H., Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V., Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S., Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H., Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N., Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F., Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G., Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z., Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C., Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y., Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S., Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K., Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R., van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H., Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M., Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C., Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S., Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K., Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M., Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C., Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A., Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.
Science 309:1559-1563(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Strain: C57BL/6J.
Tissue: Kidney, Pancreas, Small intestine and Tongue.
[3]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Mammary gland.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB049956 mRNA. Translation: BAB41009.1.
AK002588 mRNA. Translation: BAC24999.1.
AK003462 mRNA. Translation: BAC25036.1.
AK003602 mRNA. Translation: BAC25044.1.
AK007662 mRNA. Translation: BAC25181.1.
AK007838 mRNA. Translation: BAC25189.1.
AK008265 mRNA. Translation: BAC25210.1.
AK008293 mRNA. Translation: BAC25213.1.
AK009049 mRNA. Translation: BAC25237.1.
AK009703 mRNA. Translation: BAC25267.1.
BC027546 mRNA. Translation: AAH27546.1.
RefSeqNP_510964.1. NM_078479.3.
XP_006501942.1. XM_006501879.1.
UniGeneMm.24108.

3D structure databases

ProteinModelPortalP58059.
SMRP58059. Positions 12-60.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

BioGrid211361. 7 interactions.
STRING10090.ENSMUSP00000066990.

PTM databases

PhosphoSiteP58059.

Proteomic databases

PaxDbP58059.
PRIDEP58059.

Protocols and materials databases

DNASU66292.
StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000067298; ENSMUSP00000066990; ENSMUSG00000054312.
ENSMUST00000072587; ENSMUSP00000130403; ENSMUSG00000054312.
GeneID66292.
KEGGmmu:66292.
UCSCuc008qli.1. mouse.

Organism-specific databases

CTD54460.
MGIMGI:1913542. Mrps21.

Phylogenomic databases

eggNOGNOG47836.
HOGENOMHOG000007789.
HOVERGENHBG047411.
InParanoidP58059.
KOK02970.
OMADMNRKIQ.
OrthoDBEOG7W9RX2.
PhylomeDBP58059.
TreeFamTF313903.

Gene expression databases

ArrayExpressP58059.
BgeeP58059.
CleanExMM_MRPS21.
GenevestigatorP58059.

Family and domain databases

InterProIPR001911. Ribosomal_S21.
[Graphical view]
PfamPF01165. Ribosomal_S21. 1 hit.
[Graphical view]
TIGRFAMsTIGR00030. S21p. 1 hit.
ProtoNetSearch...

Other

NextBio321225.
PROP58059.
SOURCESearch...

Entry information

Entry nameRT21_MOUSE
AccessionPrimary (citable) accession number: P58059
Entry history
Integrated into UniProtKB/Swiss-Prot: May 4, 2001
Last sequence update: May 4, 2001
Last modified: April 16, 2014
This is version 93 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

MGD cross-references

Mouse Genome Database (MGD) cross-references in UniProtKB/Swiss-Prot