Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Inner membrane protein YmgF

Gene

ymgF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Could be involved in cell division. May participate in the stabilization of the cell divisome under specific conditions.1 Publication

GO - Biological processi

  • cell cycle Source: UniProtKB-KW
  • cell division Source: EcoCyc
Complete GO annotation...

Keywords - Biological processi

Cell cycle, Cell division

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2141.
ECOL316407:JW1156-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YmgF
Gene namesi
Name:ymgF
Ordered Locus Names:b4520, JW1156
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14341. ymgF.

Subcellular locationi

  • Cell inner membrane 1 Publication; Multi-pass membrane protein 1 Publication

  • Note: Localizes to the division septum. Localization requires FtsZ, FtsA, FTsQ and FtsN.

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 99CytoplasmicSequence analysis
Transmembranei10 – 3021HelicalSequence analysisAdd
BLAST
Topological domaini31 – 344PeriplasmicSequence analysis
Transmembranei35 – 5521HelicalSequence analysisAdd
BLAST
Topological domaini56 – 7217CytoplasmicSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7272Inner membrane protein YmgFPRO_0000168865Add
BLAST

Proteomic databases

PaxDbiP58034.

Interactioni

Subunit structurei

Interacts with FtsL, FtsQ, FtsI, FtsN, and probably many other cell division proteins.2 Publications

Binary interactionsi

WithEntry#Exp.IntActNotes
ftsIP0AD683EBI-1214577,EBI-548564
ftsLP0AEN43EBI-1214577,EBI-1119082
ftsQP061363EBI-1214577,EBI-1130157

Protein-protein interaction databases

BioGridi4260889. 297 interactions.
DIPiDIP-12735N.
IntActiP58034. 9 interactions.
STRINGi511145.b4520.

Structurei

3D structure databases

ProteinModelPortaliP58034.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000009428.
OMAiFINAVMW.

Sequencei

Sequence statusi: Complete.

P58034-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNSNNLDYF TLYIIFSIAF MLITLLVILI AKPSTGLGEV LVTINLLNAL
60 70
VWLAINLVNR LRERLVNHRD QQ
Length:72
Mass (Da):8,255
Last modified:April 27, 2001 - v1
Checksum:iA94BA7114B05A553
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABD18651.1.
AP009048 Genomic DNA. Translation: BAE76388.1.
RefSeqiWP_001065861.1. NZ_LN832404.1.
YP_588447.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiABD18651; ABD18651; b4520.
BAE76388; BAE76388; BAE76388.
GeneIDi1450253.
KEGGiecj:JW1156.
eco:b4520.
PATRICi32117573. VBIEscCol129921_1209.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: ABD18651.1.
AP009048 Genomic DNA. Translation: BAE76388.1.
RefSeqiWP_001065861.1. NZ_LN832404.1.
YP_588447.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP58034.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260889. 297 interactions.
DIPiDIP-12735N.
IntActiP58034. 9 interactions.
STRINGi511145.b4520.

Proteomic databases

PaxDbiP58034.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABD18651; ABD18651; b4520.
BAE76388; BAE76388; BAE76388.
GeneIDi1450253.
KEGGiecj:JW1156.
eco:b4520.
PATRICi32117573. VBIEscCol129921_1209.

Organism-specific databases

EcoGeneiEG14341. ymgF.

Phylogenomic databases

HOGENOMiHOG000009428.
OMAiFINAVMW.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2141.
ECOL316407:JW1156-MONOMER.

Miscellaneous databases

PROiP58034.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYMGF_ECOLI
AccessioniPrimary (citable) accession number: P58034
Secondary accession number(s): Q2EER3, Q2MBG8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: September 7, 2016
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.