Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Putative N-acetylmuramoyl-L-alanine amidase

Gene

amiB

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cell-wall hydrolase involved in septum cleavage during cell division.By similarity

Catalytic activityi

Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Keywords - Biological processi

Cell wall biogenesis/degradation

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-576-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Gene namesi
Name:amiB
Ordered Locus Names:BU576
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 237237Putative N-acetylmuramoyl-L-alanine amidasePRO_0000164421Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi107806.BU576.

Structurei

3D structure databases

ProteinModelPortaliP57638.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0860.
HOGENOMiHOG000163501.
KOiK01448.
OMAiFMSNRMD.
OrthoDBiEOG6CP3X3.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57638-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSKKITILID AGHGGYDPGA IGIRGLKEKN INIEIALKLE KLLNHDKMFC
60 70 80 90 100
TILTRHNDSY LSLKKRKQLL KKNQVNFLIS IHADSSRKQN VSGASIWIVS
110 120 130 140 150
KTRINREINN YLKNKSTLLF SKKIENIFKQ NKNDFFLKKT ILDLQSNNFQ
160 170 180 190 200
KIELDLSKEI LKQLEKNTKL NKKYPNYASL GILSSINTPS ILIETGFITN
210 220 230
ILEGKKLKTT NYQNKIANSI YLGLKNYFTK SSYILKK
Length:237
Mass (Da):27,240
Last modified:January 11, 2001 - v1
Checksum:iD8FD528FB89C406C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13265.1.
RefSeqiNP_240379.1. NC_002528.1.
WP_009874524.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13265; BAB13265; BAB13265.
GeneIDi1109915.
KEGGibuc:BU576.
PATRICi21244700. VBIBucAph127364_0580.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13265.1.
RefSeqiNP_240379.1. NC_002528.1.
WP_009874524.1. NC_002528.1.

3D structure databases

ProteinModelPortaliP57638.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi107806.BU576.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB13265; BAB13265; BAB13265.
GeneIDi1109915.
KEGGibuc:BU576.
PATRICi21244700. VBIBucAph127364_0580.

Phylogenomic databases

eggNOGiCOG0860.
HOGENOMiHOG000163501.
KOiK01448.
OMAiFMSNRMD.
OrthoDBiEOG6CP3X3.

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-576-MONOMER.

Family and domain databases

Gene3Di3.40.630.40. 2 hits.
InterProiIPR002508. CW_Hdrlase/autolysin_cat.
[Graphical view]
PfamiPF01520. Amidase_3. 1 hit.
[Graphical view]
SMARTiSM00646. Ami_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiAMIB_BUCAI
AccessioniPrimary (citable) accession number: P57638
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 11, 2001
Last sequence update: January 11, 2001
Last modified: July 22, 2015
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.