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P57625

- RL9_BUCAI

UniProt

P57625 - RL9_BUCAI

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Protein
50S ribosomal protein L9
Gene
rplI, BU562
Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Binds to the 23S rRNA By similarity.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-562-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L9
Gene namesi
Name:rplI
Ordered Locus Names:BU562
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 15015050S ribosomal protein L9UniRule annotation
PRO_0000176622Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliP57625.
SMRiP57625. Positions 1-148.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0359.
HOGENOMiHOG000040337.
KOiK02939.
OMAiAKSEVRM.
OrthoDBiEOG6D8BH0.

Family and domain databases

Gene3Di3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPiMF_00503. Ribosomal_L9.
InterProiIPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view]
PANTHERiPTHR21368. PTHR21368. 1 hit.
PfamiPF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view]
SUPFAMiSSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsiTIGR00158. L9. 1 hit.
PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57625-1 [UniParc]FASTAAdd to Basket

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MEVILLSKIK KLGDSGAVIN VKSGYARNFL IPKGKAILAN KKNIESFEAQ    50
RIALEKEKIN ELLIAQSRAE KLKKINSITI LSKVGKEGKI FGSVGVRNII 100
KEIILLGIKI NKKEIRLPNG LLRQVGEHIV VFQPHSKVSI NFIVKIIAKN 150
Length:150
Mass (Da):16,658
Last modified:December 1, 2000 - v1
Checksum:iD8863A1D18BCFDCB
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000003 Genomic DNA. Translation: BAB13252.1.
RefSeqiNP_240366.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13252; BAB13252; BAB13252.
GeneIDi1109902.
KEGGibuc:BU562.
PATRICi21244668. VBIBucAph127364_0565.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000003 Genomic DNA. Translation: BAB13252.1 .
RefSeqi NP_240366.1. NC_002528.1.

3D structure databases

ProteinModelPortali P57625.
SMRi P57625. Positions 1-148.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB13252 ; BAB13252 ; BAB13252 .
GeneIDi 1109902.
KEGGi buc:BU562.
PATRICi 21244668. VBIBucAph127364_0565.

Phylogenomic databases

eggNOGi COG0359.
HOGENOMi HOG000040337.
KOi K02939.
OMAi AKSEVRM.
OrthoDBi EOG6D8BH0.

Enzyme and pathway databases

BioCyci BAPH107806:GBZJ-562-MONOMER.

Family and domain databases

Gene3Di 3.10.430.100. 1 hit.
3.40.5.10. 1 hit.
HAMAPi MF_00503. Ribosomal_L9.
InterProi IPR000244. Ribosomal_L9.
IPR009027. Ribosomal_L9/RNase_H1_N.
IPR020594. Ribosomal_L9_bac/chp.
IPR020069. Ribosomal_L9_C.
IPR020070. Ribosomal_L9_N.
[Graphical view ]
PANTHERi PTHR21368. PTHR21368. 1 hit.
Pfami PF03948. Ribosomal_L9_C. 1 hit.
PF01281. Ribosomal_L9_N. 1 hit.
[Graphical view ]
SUPFAMi SSF55653. SSF55653. 1 hit.
SSF55658. SSF55658. 1 hit.
TIGRFAMsi TIGR00158. L9. 1 hit.
PROSITEi PS00651. RIBOSOMAL_L9. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiRL9_BUCAI
AccessioniPrimary (citable) accession number: P57625
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi