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P57625

- RL9_BUCAI

UniProt

P57625 - RL9_BUCAI

Protein

50S ribosomal protein L9

Gene

rplI

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (01 Dec 2000)
      Previous versions | rss
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    Functioni

    Binds to the 23S rRNA.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBAPH107806:GBZJ-562-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L9UniRule annotation
    Gene namesi
    Name:rplIUniRule annotation
    Ordered Locus Names:BU562
    OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
    Taxonomic identifieri107806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000001806: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 15015050S ribosomal protein L9PRO_0000176622Add
    BLAST

    Structurei

    3D structure databases

    ProteinModelPortaliP57625.
    SMRiP57625. Positions 1-148.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L9P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0359.
    HOGENOMiHOG000040337.
    KOiK02939.
    OMAiAKSEVRM.
    OrthoDBiEOG6D8BH0.

    Family and domain databases

    Gene3Di3.10.430.100. 1 hit.
    3.40.5.10. 1 hit.
    HAMAPiMF_00503. Ribosomal_L9.
    InterProiIPR000244. Ribosomal_L9.
    IPR009027. Ribosomal_L9/RNase_H1_N.
    IPR020594. Ribosomal_L9_bac/chp.
    IPR020069. Ribosomal_L9_C.
    IPR020070. Ribosomal_L9_N.
    [Graphical view]
    PANTHERiPTHR21368. PTHR21368. 1 hit.
    PfamiPF03948. Ribosomal_L9_C. 1 hit.
    PF01281. Ribosomal_L9_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF55653. SSF55653. 1 hit.
    SSF55658. SSF55658. 1 hit.
    TIGRFAMsiTIGR00158. L9. 1 hit.
    PROSITEiPS00651. RIBOSOMAL_L9. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P57625-1 [UniParc]FASTAAdd to Basket

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    MEVILLSKIK KLGDSGAVIN VKSGYARNFL IPKGKAILAN KKNIESFEAQ    50
    RIALEKEKIN ELLIAQSRAE KLKKINSITI LSKVGKEGKI FGSVGVRNII 100
    KEIILLGIKI NKKEIRLPNG LLRQVGEHIV VFQPHSKVSI NFIVKIIAKN 150
    Length:150
    Mass (Da):16,658
    Last modified:December 1, 2000 - v1
    Checksum:iD8863A1D18BCFDCB
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13252.1.
    RefSeqiNP_240366.1. NC_002528.1.

    Genome annotation databases

    EnsemblBacteriaiBAB13252; BAB13252; BAB13252.
    GeneIDi1109902.
    KEGGibuc:BU562.
    PATRICi21244668. VBIBucAph127364_0565.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13252.1 .
    RefSeqi NP_240366.1. NC_002528.1.

    3D structure databases

    ProteinModelPortali P57625.
    SMRi P57625. Positions 1-148.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB13252 ; BAB13252 ; BAB13252 .
    GeneIDi 1109902.
    KEGGi buc:BU562.
    PATRICi 21244668. VBIBucAph127364_0565.

    Phylogenomic databases

    eggNOGi COG0359.
    HOGENOMi HOG000040337.
    KOi K02939.
    OMAi AKSEVRM.
    OrthoDBi EOG6D8BH0.

    Enzyme and pathway databases

    BioCyci BAPH107806:GBZJ-562-MONOMER.

    Family and domain databases

    Gene3Di 3.10.430.100. 1 hit.
    3.40.5.10. 1 hit.
    HAMAPi MF_00503. Ribosomal_L9.
    InterProi IPR000244. Ribosomal_L9.
    IPR009027. Ribosomal_L9/RNase_H1_N.
    IPR020594. Ribosomal_L9_bac/chp.
    IPR020069. Ribosomal_L9_C.
    IPR020070. Ribosomal_L9_N.
    [Graphical view ]
    PANTHERi PTHR21368. PTHR21368. 1 hit.
    Pfami PF03948. Ribosomal_L9_C. 1 hit.
    PF01281. Ribosomal_L9_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55653. SSF55653. 1 hit.
    SSF55658. SSF55658. 1 hit.
    TIGRFAMsi TIGR00158. L9. 1 hit.
    PROSITEi PS00651. RIBOSOMAL_L9. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
      Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
      Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: APS.

    Entry informationi

    Entry nameiRL9_BUCAI
    AccessioniPrimary (citable) accession number: P57625
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
      Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3