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P57596

- TUSB_BUCAI

UniProt

P57596 - TUSB_BUCAI

Protein

Protein TusB

Gene

tusB

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm5s2U) at tRNA wobble positions.UniRule annotation

    GO - Biological processi

    1. tRNA wobble position uridine thiolation Source: InterPro

    Keywords - Biological processi

    tRNA processing

    Enzyme and pathway databases

    BioCyciBAPH107806:GBZJ-530-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein TusBUniRule annotation
    Alternative name(s):
    tRNA 2-thiouridine synthesizing protein BUniRule annotation
    Gene namesi
    Name:tusBUniRule annotation
    Ordered Locus Names:BU530
    OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
    Taxonomic identifieri107806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000001806: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 9595Protein TusBPRO_0000216259Add
    BLAST

    Interactioni

    Subunit structurei

    Heterohexamer, formed by a dimer of trimers. The hexameric TusBCD complex contains 2 copies each of TusB, TusC and TusD. The TusBCD complex interacts with TusE.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliP57596.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the DsrH/TusB family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2168.
    HOGENOMiHOG000284333.
    KOiK07237.
    OMAiPRICREV.
    OrthoDBiEOG6MWNF1.

    Family and domain databases

    Gene3Di3.40.1260.10. 1 hit.
    HAMAPiMF_01564. Thiourid_synth_B.
    InterProiIPR027396. DsrEFH-like.
    IPR023526. Sulphur_relay_TusB.
    IPR007215. Sulphur_relay_TusB/DsrH.
    [Graphical view]
    PfamiPF04077. DsrH. 1 hit.
    [Graphical view]
    SUPFAMiSSF75169. SSF75169. 1 hit.
    TIGRFAMsiTIGR03011. sulf_tusB_dsrH. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P57596-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLHTLMKSPF ETNVSLVISM LKKSDDFLAL QDGVLIALKD NIFLKSIIMS   50
    PVKLYLIKED VYARGIRKNI SREFILINYI HFVSLTLKHK KQMTW 95
    Length:95
    Mass (Da):11,097
    Last modified:May 16, 2006 - v2
    Checksum:i831FAB631BBB7382
    GO

    Sequence cautioni

    The sequence BAB13223.1 differs from that shown. Reason: Erroneous initiation.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13223.1. Different initiation.
    RefSeqiNP_240337.2. NC_002528.1.

    Genome annotation databases

    EnsemblBacteriaiBAB13223; BAB13223; BAB13223.
    GeneIDi1109873.
    KEGGibuc:BU530.
    PATRICi21244602. VBIBucAph127364_0535.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13223.1 . Different initiation.
    RefSeqi NP_240337.2. NC_002528.1.

    3D structure databases

    ProteinModelPortali P57596.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB13223 ; BAB13223 ; BAB13223 .
    GeneIDi 1109873.
    KEGGi buc:BU530.
    PATRICi 21244602. VBIBucAph127364_0535.

    Phylogenomic databases

    eggNOGi COG2168.
    HOGENOMi HOG000284333.
    KOi K07237.
    OMAi PRICREV.
    OrthoDBi EOG6MWNF1.

    Enzyme and pathway databases

    BioCyci BAPH107806:GBZJ-530-MONOMER.

    Family and domain databases

    Gene3Di 3.40.1260.10. 1 hit.
    HAMAPi MF_01564. Thiourid_synth_B.
    InterProi IPR027396. DsrEFH-like.
    IPR023526. Sulphur_relay_TusB.
    IPR007215. Sulphur_relay_TusB/DsrH.
    [Graphical view ]
    Pfami PF04077. DsrH. 1 hit.
    [Graphical view ]
    SUPFAMi SSF75169. SSF75169. 1 hit.
    TIGRFAMsi TIGR03011. sulf_tusB_dsrH. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
      Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
      Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: APS.

    Entry informationi

    Entry nameiTUSB_BUCAI
    AccessioniPrimary (citable) accession number: P57596
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: May 16, 2006
    Last modified: October 1, 2014
    This is version 65 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
      Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3