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P57591

- RL3_BUCAI

UniProt

P57591 - RL3_BUCAI

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Protein

50S ribosomal protein L3

Gene

rplC

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.UniRule annotation

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-HAMAP
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-524-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L3UniRule annotation
Gene namesi
Name:rplCUniRule annotation
Ordered Locus Names:BU524
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 20920950S ribosomal protein L3PRO_0000077077Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei150 – 1501N5-methylglutamineUniRule annotation

Post-translational modificationi

Methylated by PrmB.UniRule annotation

Keywords - PTMi

Methylation

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit. Forms a cluster with proteins L14 and L19.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP57591.
SMRiP57591. Positions 1-208.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L3P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0087.
HOGENOMiHOG000100368.
KOiK02906.
OMAiSMQDATH.
OrthoDBiEOG6WDSMH.

Family and domain databases

HAMAPiMF_01325_B. Ribosomal_L3_B.
InterProiIPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view]
PANTHERiPTHR11229. PTHR11229. 1 hit.
PfamiPF00297. Ribosomal_L3. 1 hit.
[Graphical view]
SUPFAMiSSF50447. SSF50447. 1 hit.
TIGRFAMsiTIGR03625. L3_bact. 1 hit.
PROSITEiPS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57591-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MIGLVGKKIG MTRIFTEEGT SIPVTVIELK ENRITQVKNI NTDLYCAIQV
60 70 80 90 100
TTGIKKSNRL NKPQSGHFLK SGVTPGRGLW EFRTDKNNNF KIGQSITINI
110 120 130 140 150
FNNVKKVDIT GISKGKGFSG TVKRWNFHTQ DATHGNSLSH RVPGSIGQNQ
160 170 180 190 200
TPGRVFKGKK MAGQLGNTRV TVQSLNIVRI DEHRNLLLVK GAVPGATGSD

LIVKPAIKV
Length:209
Mass (Da):22,841
Last modified:December 1, 2000 - v1
Checksum:iCF0D7F60C828C76F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13217.1.
RefSeqiNP_240331.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13217; BAB13217; BAB13217.
GeneIDi1109867.
KEGGibuc:BU524.
PATRICi21244590. VBIBucAph127364_0529.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13217.1 .
RefSeqi NP_240331.1. NC_002528.1.

3D structure databases

ProteinModelPortali P57591.
SMRi P57591. Positions 1-208.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB13217 ; BAB13217 ; BAB13217 .
GeneIDi 1109867.
KEGGi buc:BU524.
PATRICi 21244590. VBIBucAph127364_0529.

Phylogenomic databases

eggNOGi COG0087.
HOGENOMi HOG000100368.
KOi K02906.
OMAi SMQDATH.
OrthoDBi EOG6WDSMH.

Enzyme and pathway databases

BioCyci BAPH107806:GBZJ-524-MONOMER.

Family and domain databases

HAMAPi MF_01325_B. Ribosomal_L3_B.
InterProi IPR000597. Ribosomal_L3.
IPR019927. Ribosomal_L3_bac/org-type.
IPR019926. Ribosomal_L3_CS.
IPR009000. Transl_B-barrel.
[Graphical view ]
PANTHERi PTHR11229. PTHR11229. 1 hit.
Pfami PF00297. Ribosomal_L3. 1 hit.
[Graphical view ]
SUPFAMi SSF50447. SSF50447. 1 hit.
TIGRFAMsi TIGR03625. L3_bact. 1 hit.
PROSITEi PS00474. RIBOSOMAL_L3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiRL3_BUCAI
AccessioniPrimary (citable) accession number: P57591
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: November 26, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3