Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

30S ribosomal protein S8

Gene

rpsH

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-510-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S8UniRule annotation
Gene namesi
Name:rpsHUniRule annotation
Ordered Locus Names:BU510
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 13013030S ribosomal protein S8PRO_0000126380Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Contacts proteins S5 and S12.UniRule annotation

Protein-protein interaction databases

STRINGi107806.BU510.

Structurei

3D structure databases

ProteinModelPortaliP57577.
SMRiP57577. Positions 2-130.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein S8P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204095.
KOiK02994.
OMAiRIYKNTR.
OrthoDBiEOG6Z0QH1.

Family and domain databases

HAMAPiMF_01302_B. Ribosomal_S8_B.
InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57577-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSMQDPVADM LTRIRNGQLA NKYSVKMPSS KLKKSIIQLL KEEGYIKDYN
60 70 80 90 100
VTGDTKLELE VFLKYFQGKS VVDMIQRISR PSLRIYKNKN NLPKVMSGLG
110 120 130
IAVISTSKGV MTDRMARQEG LGGEVICYVA
Length:130
Mass (Da):14,608
Last modified:December 1, 2000 - v1
Checksum:iDEF653D91A9E3865
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13203.1.
RefSeqiNP_240317.1. NC_002528.1.
WP_009874461.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13203; BAB13203; BAB13203.
GeneIDi1109853.
KEGGibuc:BU510.
PATRICi21244562. VBIBucAph127364_0515.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13203.1.
RefSeqiNP_240317.1. NC_002528.1.
WP_009874461.1. NC_002528.1.

3D structure databases

ProteinModelPortaliP57577.
SMRiP57577. Positions 2-130.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi107806.BU510.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB13203; BAB13203; BAB13203.
GeneIDi1109853.
KEGGibuc:BU510.
PATRICi21244562. VBIBucAph127364_0515.

Phylogenomic databases

eggNOGiCOG0096.
HOGENOMiHOG000204095.
KOiK02994.
OMAiRIYKNTR.
OrthoDBiEOG6Z0QH1.

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-510-MONOMER.

Family and domain databases

HAMAPiMF_01302_B. Ribosomal_S8_B.
InterProiIPR000630. Ribosomal_S8.
[Graphical view]
PANTHERiPTHR11758. PTHR11758. 1 hit.
PfamiPF00410. Ribosomal_S8. 1 hit.
[Graphical view]
SUPFAMiSSF56047. SSF56047. 1 hit.
PROSITEiPS00053. RIBOSOMAL_S8. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiRS8_BUCAI
AccessioniPrimary (citable) accession number: P57577
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: June 24, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.