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P57573

- RL30_BUCAI

UniProt

P57573 - RL30_BUCAI

Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: InterPro

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Enzyme and pathway databases

    BioCyciBAPH107806:GBZJ-506-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    50S ribosomal protein L30UniRule annotation
    Gene namesi
    Name:rpmDUniRule annotation
    Ordered Locus Names:BU506
    OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
    Taxonomic identifieri107806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000001806: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. large ribosomal subunit Source: InterPro

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 595950S ribosomal protein L30PRO_0000104585Add
    BLAST

    Proteomic databases

    PRIDEiP57573.

    Interactioni

    Subunit structurei

    Part of the 50S ribosomal subunit.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliP57573.
    SMRiP57573. Positions 2-58.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein L30P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1841.
    HOGENOMiHOG000039916.
    KOiK02907.
    OMAiTENTANQ.
    OrthoDBiEOG6BGP7P.

    Family and domain databases

    Gene3Di3.30.1390.20. 1 hit.
    HAMAPiMF_01371_B. Ribosomal_L30_B.
    InterProiIPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view]
    PfamiPF00327. Ribosomal_L30. 1 hit.
    [Graphical view]
    PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMiSSF55129. SSF55129. 1 hit.
    TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P57573-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKNIKITQIK SAIGRLPKHK KTLIGLGLRY IGHTVIREDT PSIQGMVKKI   50
    SYILKIQEE 59
    Length:59
    Mass (Da):6,729
    Last modified:December 1, 2000 - v1
    Checksum:i9569C6DF21FEA100
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13199.1.
    RefSeqiNP_240313.1. NC_002528.1.

    Genome annotation databases

    EnsemblBacteriaiBAB13199; BAB13199; BAB13199.
    GeneIDi1109849.
    KEGGibuc:BU506.
    PATRICi21244554. VBIBucAph127364_0511.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13199.1 .
    RefSeqi NP_240313.1. NC_002528.1.

    3D structure databases

    ProteinModelPortali P57573.
    SMRi P57573. Positions 2-58.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PRIDEi P57573.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB13199 ; BAB13199 ; BAB13199 .
    GeneIDi 1109849.
    KEGGi buc:BU506.
    PATRICi 21244554. VBIBucAph127364_0511.

    Phylogenomic databases

    eggNOGi COG1841.
    HOGENOMi HOG000039916.
    KOi K02907.
    OMAi TENTANQ.
    OrthoDBi EOG6BGP7P.

    Enzyme and pathway databases

    BioCyci BAPH107806:GBZJ-506-MONOMER.

    Family and domain databases

    Gene3Di 3.30.1390.20. 1 hit.
    HAMAPi MF_01371_B. Ribosomal_L30_B.
    InterProi IPR005996. Ribosomal_L30_bac-type.
    IPR016082. Ribosomal_L30_ferredoxin-like.
    [Graphical view ]
    Pfami PF00327. Ribosomal_L30. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
    SUPFAMi SSF55129. SSF55129. 1 hit.
    TIGRFAMsi TIGR01308. rpmD_bact. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
      Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
      Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: APS.

    Entry informationi

    Entry nameiRL30_BUCAI
    AccessioniPrimary (citable) accession number: P57573
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
      Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3