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P57573

- RL30_BUCAI

UniProt

P57573 - RL30_BUCAI

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Protein

50S ribosomal protein L30

Gene

rpmD

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-506-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L30UniRule annotation
Gene namesi
Name:rpmDUniRule annotation
Ordered Locus Names:BU506
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. large ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 595950S ribosomal protein L30PRO_0000104585Add
BLAST

Proteomic databases

PRIDEiP57573.

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP57573.
SMRiP57573. Positions 2-58.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ribosomal protein L30P family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1841.
HOGENOMiHOG000039916.
KOiK02907.
OMAiTENTANQ.
OrthoDBiEOG6BGP7P.

Family and domain databases

Gene3Di3.30.1390.20. 1 hit.
HAMAPiMF_01371_B. Ribosomal_L30_B.
InterProiIPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view]
PfamiPF00327. Ribosomal_L30. 1 hit.
[Graphical view]
PIRSFiPIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMiSSF55129. SSF55129. 1 hit.
TIGRFAMsiTIGR01308. rpmD_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

P57573-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNIKITQIK SAIGRLPKHK KTLIGLGLRY IGHTVIREDT PSIQGMVKKI

SYILKIQEE
Length:59
Mass (Da):6,729
Last modified:December 1, 2000 - v1
Checksum:i9569C6DF21FEA100
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13199.1.
RefSeqiNP_240313.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13199; BAB13199; BAB13199.
GeneIDi1109849.
KEGGibuc:BU506.
PATRICi21244554. VBIBucAph127364_0511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13199.1 .
RefSeqi NP_240313.1. NC_002528.1.

3D structure databases

ProteinModelPortali P57573.
SMRi P57573. Positions 2-58.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PRIDEi P57573.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB13199 ; BAB13199 ; BAB13199 .
GeneIDi 1109849.
KEGGi buc:BU506.
PATRICi 21244554. VBIBucAph127364_0511.

Phylogenomic databases

eggNOGi COG1841.
HOGENOMi HOG000039916.
KOi K02907.
OMAi TENTANQ.
OrthoDBi EOG6BGP7P.

Enzyme and pathway databases

BioCyci BAPH107806:GBZJ-506-MONOMER.

Family and domain databases

Gene3Di 3.30.1390.20. 1 hit.
HAMAPi MF_01371_B. Ribosomal_L30_B.
InterProi IPR005996. Ribosomal_L30_bac-type.
IPR016082. Ribosomal_L30_ferredoxin-like.
[Graphical view ]
Pfami PF00327. Ribosomal_L30. 1 hit.
[Graphical view ]
PIRSFi PIRSF002211. Ribosomal_L30_bac-type. 1 hit.
SUPFAMi SSF55129. SSF55129. 1 hit.
TIGRFAMsi TIGR01308. rpmD_bact. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiRL30_BUCAI
AccessioniPrimary (citable) accession number: P57573
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: October 1, 2014
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3