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Protein

Uncharacterized MscS family protein BU452

Gene

BU452

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized MscS family protein BU452
Gene namesi
Ordered Locus Names:BU452
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeBuchnera
Proteomesi
  • UP000001806 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 72HelicalSequence analysisAdd BLAST21
Transmembranei89 – 109HelicalSequence analysisAdd BLAST21
Transmembranei120 – 140HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001102461 – 305Uncharacterized MscS family protein BU452Add BLAST305

Interactioni

Protein-protein interaction databases

STRINGi107806.BU452.

Structurei

3D structure databases

ProteinModelPortaliP57527.
SMRiP57527.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105D64. Bacteria.
COG0668. LUCA.
HOGENOMiHOG000110050.
KOiK03442.
OMAiGRQWAVQ.

Family and domain databases

InterProiView protein in InterPro
IPR010920. LSM_dom.
IPR011066. MscC_channel_C.
IPR006685. MscS_channel.
IPR006686. MscS_channel_CS.
IPR011014. MscS_channel_TM-2.
IPR008910. TM_helix.
PfamiView protein in Pfam
PF00924. MS_channel. 1 hit.
PF05552. TM_helix. 1 hit.
SUPFAMiSSF50182. SSF50182. 1 hit.
SSF82689. SSF82689. 1 hit.
SSF82861. SSF82861. 1 hit.
PROSITEiView protein in PROSITE
PS01246. UPF0003. 1 hit.

Sequencei

Sequence statusi: Complete.

P57527-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLFIKIEIIA KTLLIINKKY TEIKMDELNV VNNINHAGTW LIRNQELLLR
60 70 80 90 100
YTINLTSAII ILVVGMFISK IISNGANQVL ITRNIDATIA GFLSALMRYI
110 120 130 140 150
IITFTFIAAL GRIGVQTTSV IAILGAAGMA IGLALQGSLS NFAAGVLLVT
160 170 180 190 200
LRPLKTEEYV DLGSVSGTVL NIHIFYTTLR TLDGKIVVVP NNKIISGNII
210 220 230 240 250
NYSREPARRN EFIISVSYNS DIDLVIKILR SVIEKEERVI KDKDIIVGLS
260 270 280 290 300
ELAPSSLNFI VRCWSKNHDL NTVYWDLMAK FKKELDKNNI NIPFPQLDVH

VYKKK
Length:305
Mass (Da):34,129
Last modified:December 1, 2000 - v1
Checksum:i6F99B52D3EB9AA56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13150.1.
RefSeqiNP_240264.2. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13150; BAB13150; BAB13150.
GeneIDi1109800.
KEGGibuc:BU452.
PATRICifig|107806.10.peg.462.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiY452_BUCAI
AccessioniPrimary (citable) accession number: P57527
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: June 7, 2017
This is version 90 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families