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P57527 (Y452_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 76. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Uncharacterized MscS family protein BU452
Gene names
Ordered Locus Names:BU452
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) [Reference proteome] [HAMAP]
Taxonomic identifier107806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length305 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Cell membrane; Multi-pass membrane protein Potential.

Sequence similarities

Belongs to the MscS (TC 1.A.23) family. [View classification]

Ontologies

Keywords
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
Transmembrane helix
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processtransmembrane transport

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

plasma membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 305305Uncharacterized MscS family protein BU452
PRO_0000110246

Regions

Transmembrane52 – 7221Helical; Potential
Transmembrane89 – 10921Helical; Potential
Transmembrane120 – 14021Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
P57527 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: 6F99B52D3EB9AA56

FASTA30534,129
        10         20         30         40         50         60 
MLFIKIEIIA KTLLIINKKY TEIKMDELNV VNNINHAGTW LIRNQELLLR YTINLTSAII 

        70         80         90        100        110        120 
ILVVGMFISK IISNGANQVL ITRNIDATIA GFLSALMRYI IITFTFIAAL GRIGVQTTSV 

       130        140        150        160        170        180 
IAILGAAGMA IGLALQGSLS NFAAGVLLVT LRPLKTEEYV DLGSVSGTVL NIHIFYTTLR 

       190        200        210        220        230        240 
TLDGKIVVVP NNKIISGNII NYSREPARRN EFIISVSYNS DIDLVIKILR SVIEKEERVI 

       250        260        270        280        290        300 
KDKDIIVGLS ELAPSSLNFI VRCWSKNHDL NTVYWDLMAK FKKELDKNNI NIPFPQLDVH 


VYKKK 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000003 Genomic DNA. Translation: BAB13150.1.
RefSeqNP_240264.2. NC_002528.1.

3D structure databases

ProteinModelPortalP57527.
SMRP57527. Positions 51-300.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB13150; BAB13150; BAB13150.
GeneID1109800.
KEGGbuc:BU452.
PATRIC21244446. VBIBucAph127364_0462.

Phylogenomic databases

eggNOGCOG0668.
HOGENOMHOG000110050.
KOK03442.
OMAGEDYNKV.
OrthoDBEOG61GG69.
ProtClustDBCLSK380368.

Enzyme and pathway databases

BioCycBAPH107806:GBZJ-452-MONOMER.

Family and domain databases

InterProIPR010920. LSM_dom.
IPR011066. MscC_channel_C.
IPR006685. MscS_channel.
IPR006686. MscS_channel_CS.
IPR011014. MscS_channel_TM-2.
IPR008910. TM_helix.
[Graphical view]
PfamPF00924. MS_channel. 1 hit.
PF05552. TM_helix. 1 hit.
[Graphical view]
SUPFAMSSF50182. SSF50182. 1 hit.
SSF82689. SSF82689. 1 hit.
SSF82861. SSF82861. 1 hit.
PROSITEPS01246. UPF0003. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY452_BUCAI
AccessionPrimary (citable) accession number: P57527
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: February 19, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names