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Protein

UPF0056 membrane protein BU449

Gene

BU449

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0056 membrane protein BU449
Gene namesi
Ordered Locus Names:BU449
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeBuchnera
Proteomesi
  • UP000001806 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei8 – 28HelicalSequence analysisAdd BLAST21
Transmembranei45 – 65HelicalSequence analysisAdd BLAST21
Transmembranei71 – 91HelicalSequence analysisAdd BLAST21
Transmembranei105 – 125HelicalSequence analysisAdd BLAST21
Transmembranei134 – 154HelicalSequence analysisAdd BLAST21
Transmembranei174 – 194HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001569101 – 196UPF0056 membrane protein BU449Add BLAST196

Proteomic databases

PRIDEiP57524.

Interactioni

Protein-protein interaction databases

STRINGi107806.BU449.

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0056 (MarC) family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG41076UM. Bacteria.
COG2095. LUCA.
HOGENOMiHOG000112970.
OMAiIRMIFPQ.

Family and domain databases

InterProiIPR002771. Multi_antbiot-R_MarC.
[Graphical view]
PfamiPF01914. MarC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57524-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTEIISTTIL LVLIMDPLGN LPIFMTILKH LDVKRRRIVV IREMIIALIV
60 70 80 90 100
MLLFLFVGEK ILIILNLKTE TVSISGGVIL FLIAIKMIFP SEDNNNEISS
110 120 130 140 150
SEEPFLVPLA IPLVAGPSLL ATLMLLSHQY LHHMFYLVGS LLISWFFTVI
160 170 180 190
ILLSSSLFLK LFGSKGVNAL ERLMGLVLIM LSTQMFLDGI RAWFKN
Length:196
Mass (Da):22,056
Last modified:November 15, 2002 - v2
Checksum:i86D841D9073C93DD
GO

Sequence cautioni

The sequence BAB13147 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13147.1. Different initiation.
RefSeqiNP_240261.2. NC_002528.1.
WP_010896122.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13147; BAB13147; BAB13147.
GeneIDi1109797.
KEGGibuc:BU449.
PATRICi21244440. VBIBucAph127364_0459.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13147.1. Different initiation.
RefSeqiNP_240261.2. NC_002528.1.
WP_010896122.1. NC_002528.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi107806.BU449.

Proteomic databases

PRIDEiP57524.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB13147; BAB13147; BAB13147.
GeneIDi1109797.
KEGGibuc:BU449.
PATRICi21244440. VBIBucAph127364_0459.

Phylogenomic databases

eggNOGiENOG41076UM. Bacteria.
COG2095. LUCA.
HOGENOMiHOG000112970.
OMAiIRMIFPQ.

Family and domain databases

InterProiIPR002771. Multi_antbiot-R_MarC.
[Graphical view]
PfamiPF01914. MarC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiY449_BUCAI
AccessioniPrimary (citable) accession number: P57524
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: November 15, 2002
Last modified: November 2, 2016
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.