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Protein

Carbon storage regulator homolog

Gene

csrA

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could accelerate the degradation of some genes transcripts potentially through selective RNA binding.By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Ligandi

RNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Carbon storage regulator homolog
Gene namesi
Name:csrA
Ordered Locus Names:BU404
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesErwiniaceaeBuchnera
Proteomesi
  • UP000001806 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001770521 – 57Carbon storage regulator homologAdd BLAST57

Interactioni

Protein-protein interaction databases

STRINGi107806.BU404.

Structurei

3D structure databases

ProteinModelPortaliP57484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the CsrA family.Curated

Phylogenomic databases

eggNOGiENOG4105VM8. Bacteria.
COG1551. LUCA.
HOGENOMiHOG000020767.
KOiK03563.
OMAiIYARIQR.

Family and domain databases

HAMAPiMF_00167. CsrA. 1 hit.
InterProiIPR003751. CsrA.
[Graphical view]
PfamiPF02599. CsrA. 1 hit.
[Graphical view]
ProDomiPD009007. CsrA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00202. csrA. 1 hit.

Sequencei

Sequence statusi: Complete.

P57484-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLILTRRVGE TLIIGDEITV TVLGVKGNQV RIGVNAPKEV SVHREEIYQR

IQAEKKK
Length:57
Mass (Da):6,428
Last modified:December 1, 2000 - v1
Checksum:i3F331D1C44D1B310
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13107.1.
RefSeqiNP_240221.1. NC_002528.1.
WP_009874362.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13107; BAB13107; BAB13107.
GeneIDi1109757.
KEGGibuc:BU404.
PATRICi21244348. VBIBucAph127364_0418.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13107.1.
RefSeqiNP_240221.1. NC_002528.1.
WP_009874362.1. NC_002528.1.

3D structure databases

ProteinModelPortaliP57484.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi107806.BU404.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB13107; BAB13107; BAB13107.
GeneIDi1109757.
KEGGibuc:BU404.
PATRICi21244348. VBIBucAph127364_0418.

Phylogenomic databases

eggNOGiENOG4105VM8. Bacteria.
COG1551. LUCA.
HOGENOMiHOG000020767.
KOiK03563.
OMAiIYARIQR.

Family and domain databases

HAMAPiMF_00167. CsrA. 1 hit.
InterProiIPR003751. CsrA.
[Graphical view]
PfamiPF02599. CsrA. 1 hit.
[Graphical view]
ProDomiPD009007. CsrA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR00202. csrA. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiCSRA_BUCAI
AccessioniPrimary (citable) accession number: P57484
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: November 2, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.