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Protein

Metalloprotease TldD homolog

Gene

tldD

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probable metalloprotease.By similarity

GO - Molecular functioni

  1. metallopeptidase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase, Metalloprotease, Protease

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-398-MONOMER.

Protein family/group databases

MEROPSiU62.002.

Names & Taxonomyi

Protein namesi
Recommended name:
Metalloprotease TldD homolog (EC:3.4.-.-)
Gene namesi
Name:tldD
Ordered Locus Names:BU398
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 483483Metalloprotease TldD homologPRO_0000142354Add
BLAST

Proteomic databases

PRIDEiP57478.

Structurei

3D structure databases

ProteinModelPortaliP57478.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the peptidase U62 family.Curated

Phylogenomic databases

eggNOGiCOG0312.
HOGENOMiHOG000224929.
KOiK03568.
OMAiVDDADLY.
OrthoDBiEOG65J4ZF.

Family and domain databases

InterProiIPR025502. TldD.
IPR002510. TldD/PmbA.
[Graphical view]
PfamiPF01523. PmbA_TldD. 1 hit.
[Graphical view]
PIRSFiPIRSF004919. TldD. 1 hit.

Sequencei

Sequence statusi: Complete.

P57478-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTFELVTESL LNANKINDQD VFIALEELCT RQLDYGDLYF QSHIHESWIL
60 70 80 90 100
ENSIIKEGNY HSDAGIGVRA IRGESTGFAY SDQISLDSLR RSTKKAHSII
110 120 130 140 150
LTKGSGKTKT LSKKTIEPIY KNVNPLEGFS SKEKTDLLYR ANYIARSLDH
160 170 180 190 200
RVIEVNASLT GSYEQILVAS TDGNLVSDIR PSIQFSISVL VEDHGKRERG
210 220 230 240 250
RSGGGSRTDY NFFLNQDDSS KEIRIDHWSK EAVRIALLNL SSKEALSGTF
260 270 280 290 300
PVVLGSGWPG VLLHEAIGHG LEGDFNRKGT SIFTNMIGKK VASELCTIID
310 320 330 340 350
DGTIKNQRGS LSIDDEGTPG QKNILIENGI LKKYMQDKLN ARLMGVKSTG
360 370 380 390 400
NGRRESYSCL PMPRMTNTYM LSGKSKLDDI IKSVDYGIYA VNFSGGQVDI
410 420 430 440 450
TSGKFVFSTS EAYLIKNGKI VTPIKNTTLI GSGLEVMQKI SMVGDDLKMD
460 470 480
EGMGICGKDG QNIPVGIGQP SMKLENLTIG GTV
Length:483
Mass (Da):52,977
Last modified:December 1, 2000 - v1
Checksum:iA05CE98518720EBA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13101.1.
RefSeqiNP_240215.1. NC_002528.1.
WP_010896099.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13101; BAB13101; BAB13101.
GeneIDi1109751.
KEGGibuc:BU398.
PATRICi21244336. VBIBucAph127364_0412.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB13101.1.
RefSeqiNP_240215.1. NC_002528.1.
WP_010896099.1. NC_002528.1.

3D structure databases

ProteinModelPortaliP57478.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

MEROPSiU62.002.

Proteomic databases

PRIDEiP57478.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB13101; BAB13101; BAB13101.
GeneIDi1109751.
KEGGibuc:BU398.
PATRICi21244336. VBIBucAph127364_0412.

Phylogenomic databases

eggNOGiCOG0312.
HOGENOMiHOG000224929.
KOiK03568.
OMAiVDDADLY.
OrthoDBiEOG65J4ZF.

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-398-MONOMER.

Family and domain databases

InterProiIPR025502. TldD.
IPR002510. TldD/PmbA.
[Graphical view]
PfamiPF01523. PmbA_TldD. 1 hit.
[Graphical view]
PIRSFiPIRSF004919. TldD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiTLDD_BUCAI
AccessioniPrimary (citable) accession number: P57478
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: February 4, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. Peptidase families
    Classification of peptidase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.