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P57455

- RS15_BUCAI

UniProt

P57455 - RS15_BUCAI

Protein

30S ribosomal protein S15

Gene

rpsO

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.UniRule annotation
    Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.UniRule annotation

    GO - Molecular functioni

    1. rRNA binding Source: UniProtKB-HAMAP
    2. structural constituent of ribosome Source: InterPro

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Keywords - Ligandi

    RNA-binding, rRNA-binding

    Enzyme and pathway databases

    BioCyciBAPH107806:GBZJ-374-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S15UniRule annotation
    Gene namesi
    Name:rpsOUniRule annotation
    Ordered Locus Names:BU374
    OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
    Taxonomic identifieri107806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000001806: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 898930S ribosomal protein S15PRO_0000115402Add
    BLAST

    Interactioni

    Subunit structurei

    Part of the 30S ribosomal subunit. Forms a bridge to the 50S subunit in the 70S ribosome, contacting the 23S rRNA.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliP57455.
    SMRiP57455. Positions 2-89.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S15P family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0184.
    HOGENOMiHOG000040097.
    KOiK02956.
    OMAiQTIAHEY.
    OrthoDBiEOG6B368J.

    Family and domain databases

    Gene3Di1.10.287.10. 1 hit.
    HAMAPiMF_01343_B. Ribosomal_S15_B.
    InterProiIPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view]
    PfamiPF00312. Ribosomal_S15. 1 hit.
    [Graphical view]
    SUPFAMiSSF47060. SSF47060. 1 hit.
    TIGRFAMsiTIGR00952. S15_bact. 1 hit.
    PROSITEiPS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    P57455-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSLSAIDTKK IILKYGKSEQ NSGITEVQVV LLTNQINYLQ IHFSQHKKDH   50
    CSRRGLLNMV SKRRKLLDYL KKKNISRYSA LIEDLHLRR 89
    Length:89
    Mass (Da):10,467
    Last modified:December 1, 2000 - v1
    Checksum:i396626942D5EBF5E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13078.1.
    RefSeqiNP_240192.1. NC_002528.1.

    Genome annotation databases

    EnsemblBacteriaiBAB13078; BAB13078; BAB13078.
    GeneIDi1109728.
    KEGGibuc:BU374.
    PATRICi21244286. VBIBucAph127364_0388.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13078.1 .
    RefSeqi NP_240192.1. NC_002528.1.

    3D structure databases

    ProteinModelPortali P57455.
    SMRi P57455. Positions 2-89.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB13078 ; BAB13078 ; BAB13078 .
    GeneIDi 1109728.
    KEGGi buc:BU374.
    PATRICi 21244286. VBIBucAph127364_0388.

    Phylogenomic databases

    eggNOGi COG0184.
    HOGENOMi HOG000040097.
    KOi K02956.
    OMAi QTIAHEY.
    OrthoDBi EOG6B368J.

    Enzyme and pathway databases

    BioCyci BAPH107806:GBZJ-374-MONOMER.

    Family and domain databases

    Gene3Di 1.10.287.10. 1 hit.
    HAMAPi MF_01343_B. Ribosomal_S15_B.
    InterProi IPR000589. Ribosomal_S15.
    IPR005290. Ribosomal_S15_bac-type.
    IPR009068. S15_NS1_RNA-bd.
    [Graphical view ]
    Pfami PF00312. Ribosomal_S15. 1 hit.
    [Graphical view ]
    SUPFAMi SSF47060. SSF47060. 1 hit.
    TIGRFAMsi TIGR00952. S15_bact. 1 hit.
    PROSITEi PS00362. RIBOSOMAL_S15. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
      Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
      Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: APS.

    Entry informationi

    Entry nameiRS15_BUCAI
    AccessioniPrimary (citable) accession number: P57455
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
      Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3