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P57413

- RSMC_BUCAI

UniProt

P57413 - RSMC_BUCAI

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Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

Catalytic activityi

S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

GO - Molecular functioni

  1. 16S rRNA (guanine(1207)-N(2))-methyltransferase activity Source: UniProtKB-EC
  2. nucleic acid binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Biological processi

rRNA processing

Keywords - Ligandi

S-adenosyl-L-methionine

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-328-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
Alternative name(s):
16S rRNA m2G1207 methyltransferaseUniRule annotation
rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
Gene namesi
Name:rsmCUniRule annotation
Ordered Locus Names:BU328
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

Subcellular locationi

Cytoplasm UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 338338Ribosomal RNA small subunit methyltransferase CPRO_0000097487Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliP57413.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2813.
HOGENOMiHOG000218308.
KOiK00564.
OMAiRHCQLWQ.
OrthoDBiEOG67X1ZC.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
HAMAPiMF_01862. 16SrRNA_methyltr_C.
InterProiIPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases-like.
IPR007848. Small_mtfrase_dom.
[Graphical view]
PfamiPF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view]
SUPFAMiSSF53335. SSF53335. 1 hit.

Sequencei

Sequence statusi: Complete.

P57413-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLLSKNSQLI LRHRKKFKTK KVFFSGNIQD DFPLSLSTMR TKINFHKYND
60 70 80 90 100
CIDFKKKIMN NNIVHNNLLI SQEMIQNCDV IIYYWPKDKS EAKFQLMNII
110 120 130 140 150
SCSPINTEIF IVGNNSSGVK SAPLMLKKWI ELEKIDSAKH SILISGLIKK
160 170 180 190 200
KAIFVLEDFF KTHLWKNLII KSLPGVFGHK KIDSGSKLLA STFSNRITGK
210 220 230 240 250
VLDIGCGTGF LSASLLYFSP DAILTLVDNN MYALKCSQYT LNSNKFNGKI
260 270 280 290 300
VYSNLYSNVF KKFDLIISNP PFHNDLQINF NIIEKMICGA KKYLTKTGEL
310 320 330
RFVTSRFINC HFLLNKFFQK YYVIKETSQY KVYQAFYK
Length:338
Mass (Da):39,105
Last modified:December 1, 2000 - v1
Checksum:iE43516DDD22FA014
GO

Sequence cautioni

The sequence BAB13036.1 differs from that shown. Reason: Frameshift at position 57.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000003 Genomic DNA. Translation: BAB13036.1. Frameshift.
RefSeqiNP_240150.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB13036; BAB13036; BAB13036.
GeneIDi1110027.
KEGGibuc:BU328.
PATRICi21244186. VBIBucAph127364_0341.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BA000003 Genomic DNA. Translation: BAB13036.1 . Frameshift.
RefSeqi NP_240150.1. NC_002528.1.

3D structure databases

ProteinModelPortali P57413.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAB13036 ; BAB13036 ; BAB13036 .
GeneIDi 1110027.
KEGGi buc:BU328.
PATRICi 21244186. VBIBucAph127364_0341.

Phylogenomic databases

eggNOGi COG2813.
HOGENOMi HOG000218308.
KOi K00564.
OMAi RHCQLWQ.
OrthoDBi EOG67X1ZC.

Enzyme and pathway databases

BioCyci BAPH107806:GBZJ-328-MONOMER.

Family and domain databases

Gene3Di 3.40.50.150. 1 hit.
HAMAPi MF_01862. 16SrRNA_methyltr_C.
InterProi IPR002052. DNA_methylase_N6_adenine_CS.
IPR013675. Mtase_sm_N.
IPR023543. rRNA_ssu_MeTfrase_C.
IPR029063. SAM-dependent_MTases-like.
IPR007848. Small_mtfrase_dom.
[Graphical view ]
Pfami PF05175. MTS. 1 hit.
PF08468. MTS_N. 1 hit.
[Graphical view ]
SUPFAMi SSF53335. SSF53335. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiRSMC_BUCAI
AccessioniPrimary (citable) accession number: P57413
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: October 29, 2014
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3