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P57413

- RSMC_BUCAI

UniProt

P57413 - RSMC_BUCAI

Protein

Ribosomal RNA small subunit methyltransferase C

Gene

rsmC

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 85 (01 Oct 2014)
      Sequence version 1 (01 Dec 2000)
      Previous versions | rss
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    Functioni

    Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle.UniRule annotation

    Catalytic activityi

    S-adenosyl-L-methionine + guanine(1207) in 16S rRNA = S-adenosyl-L-homocysteine + N(2)-methylguanine(1207) in 16S rRNA.UniRule annotation

    GO - Molecular functioni

    1. 16S rRNA (guanine(1207)-N(2))-methyltransferase activity Source: UniProtKB-EC
    2. nucleic acid binding Source: InterPro

    Keywords - Molecular functioni

    Methyltransferase, Transferase

    Keywords - Biological processi

    rRNA processing

    Keywords - Ligandi

    S-adenosyl-L-methionine

    Enzyme and pathway databases

    BioCyciBAPH107806:GBZJ-328-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosomal RNA small subunit methyltransferase CUniRule annotation (EC:2.1.1.172UniRule annotation)
    Alternative name(s):
    16S rRNA m2G1207 methyltransferaseUniRule annotation
    rRNA (guanine-N(2)-)-methyltransferase RsmCUniRule annotation
    Gene namesi
    Name:rsmCUniRule annotation
    Ordered Locus Names:BU328
    OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
    Taxonomic identifieri107806 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
    ProteomesiUP000001806: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 338338Ribosomal RNA small subunit methyltransferase CPRO_0000097487Add
    BLAST

    Interactioni

    Subunit structurei

    Monomer.UniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliP57413.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the methyltransferase superfamily. RsmC family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG2813.
    HOGENOMiHOG000218308.
    KOiK00564.
    OMAiRHCQLWQ.
    OrthoDBiEOG67X1ZC.

    Family and domain databases

    Gene3Di3.40.50.150. 1 hit.
    HAMAPiMF_01862. 16SrRNA_methyltr_C.
    InterProiIPR002052. DNA_methylase_N6_adenine_CS.
    IPR013675. Mtase_sm_N.
    IPR023543. rRNA_ssu_MeTfrase_C.
    IPR029063. SAM-dependent_MTases-like.
    IPR007848. Small_mtfrase_dom.
    [Graphical view]
    PfamiPF05175. MTS. 1 hit.
    PF08468. MTS_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF53335. SSF53335. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P57413-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLLSKNSQLI LRHRKKFKTK KVFFSGNIQD DFPLSLSTMR TKINFHKYND    50
    CIDFKKKIMN NNIVHNNLLI SQEMIQNCDV IIYYWPKDKS EAKFQLMNII 100
    SCSPINTEIF IVGNNSSGVK SAPLMLKKWI ELEKIDSAKH SILISGLIKK 150
    KAIFVLEDFF KTHLWKNLII KSLPGVFGHK KIDSGSKLLA STFSNRITGK 200
    VLDIGCGTGF LSASLLYFSP DAILTLVDNN MYALKCSQYT LNSNKFNGKI 250
    VYSNLYSNVF KKFDLIISNP PFHNDLQINF NIIEKMICGA KKYLTKTGEL 300
    RFVTSRFINC HFLLNKFFQK YYVIKETSQY KVYQAFYK 338
    Length:338
    Mass (Da):39,105
    Last modified:December 1, 2000 - v1
    Checksum:iE43516DDD22FA014
    GO

    Sequence cautioni

    The sequence BAB13036.1 differs from that shown. Reason: Frameshift at position 57.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13036.1. Frameshift.
    RefSeqiNP_240150.1. NC_002528.1.

    Genome annotation databases

    EnsemblBacteriaiBAB13036; BAB13036; BAB13036.
    GeneIDi1110027.
    KEGGibuc:BU328.
    PATRICi21244186. VBIBucAph127364_0341.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BA000003 Genomic DNA. Translation: BAB13036.1 . Frameshift.
    RefSeqi NP_240150.1. NC_002528.1.

    3D structure databases

    ProteinModelPortali P57413.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAB13036 ; BAB13036 ; BAB13036 .
    GeneIDi 1110027.
    KEGGi buc:BU328.
    PATRICi 21244186. VBIBucAph127364_0341.

    Phylogenomic databases

    eggNOGi COG2813.
    HOGENOMi HOG000218308.
    KOi K00564.
    OMAi RHCQLWQ.
    OrthoDBi EOG67X1ZC.

    Enzyme and pathway databases

    BioCyci BAPH107806:GBZJ-328-MONOMER.

    Family and domain databases

    Gene3Di 3.40.50.150. 1 hit.
    HAMAPi MF_01862. 16SrRNA_methyltr_C.
    InterProi IPR002052. DNA_methylase_N6_adenine_CS.
    IPR013675. Mtase_sm_N.
    IPR023543. rRNA_ssu_MeTfrase_C.
    IPR029063. SAM-dependent_MTases-like.
    IPR007848. Small_mtfrase_dom.
    [Graphical view ]
    Pfami PF05175. MTS. 1 hit.
    PF08468. MTS_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53335. SSF53335. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
      Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
      Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: APS.

    Entry informationi

    Entry nameiRSMC_BUCAI
    AccessioniPrimary (citable) accession number: P57413
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: December 1, 2000
    Last sequence update: December 1, 2000
    Last modified: October 1, 2014
    This is version 85 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
      Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3