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Protein

UPF0162 protein BU173

Gene

BU173

Organism
Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-172-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
UPF0162 protein BU173
Gene namesi
Ordered Locus Names:BU173
OrganismiBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifieri107806 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera
ProteomesiUP000001806: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 269269UPF0162 protein BU173PRO_0000202381Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0162 family.Curated

Phylogenomic databases

eggNOGiCOG2912.
HOGENOMiHOG000281267.
OMAiNYFVEQC.
OrthoDBiEOG6P334F.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR011990. TPR-like_helical_dom.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P57270-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSLSNIDFS KLSLFESIIV ASQAIREDFP SHSVLTELKN RIKEAESYIS
60 70 80 90 100
SENEPDRKLE KLLQLFYTQW NFGGASGVYK LSDTLWIDNV LKTRKGTAVS
110 120 130 140 150
LGIIFLHIAQ SLKLPLNPVV FPTQLILRAD WINEKKWLIN PFNGEILDQH
160 170 180 190 200
TLEVWLKGNI SPTAELYEND LYKSESITVI RKMLDTLKAA LMEEKKMELA
210 220 230 240 250
LNVTNLLIKI DPNDPYEIRD RGLIYAQLEC NHVALTDLIY FVEHCPEDPI
260
SEIIKIQIHS IEQKKTILH
Length:269
Mass (Da):30,934
Last modified:March 1, 2001 - v1
Checksum:i06AAEC32F8E504FA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB12890.1.
RefSeqiNP_240004.1. NC_002528.1.

Genome annotation databases

EnsemblBacteriaiBAB12890; BAB12890; BAB12890.
GeneIDi1109616.
KEGGibuc:BU173.
PATRICi21243864. VBIBucAph127364_0184.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BA000003 Genomic DNA. Translation: BAB12890.1.
RefSeqiNP_240004.1. NC_002528.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAB12890; BAB12890; BAB12890.
GeneIDi1109616.
KEGGibuc:BU173.
PATRICi21243864. VBIBucAph127364_0184.

Phylogenomic databases

eggNOGiCOG2912.
HOGENOMiHOG000281267.
OMAiNYFVEQC.
OrthoDBiEOG6P334F.

Enzyme and pathway databases

BioCyciBAPH107806:GBZJ-172-MONOMER.

Family and domain databases

Gene3Di1.25.40.10. 1 hit.
InterProiIPR011990. TPR-like_helical_dom.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
    Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
    Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: APS.

Entry informationi

Entry nameiY173_BUCAI
AccessioniPrimary (citable) accession number: P57270
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 1, 2001
Last sequence update: March 1, 2001
Last modified: January 7, 2015
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Buchnera aphidicola (subsp. Acyrthosiphon pisum)
    Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families
  3. Uncharacterized protein families (UPF)
    List of uncharacterized protein family (UPF) entries

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.