P57235 (SYGB_BUCAI) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 63.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Glycine--tRNA ligase beta subunit EC=6.1.1.14 Alternative name(s): Glycyl-tRNA synthetase beta subunit Short name=GlyRS | ||||
| Gene names |
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| Organism | Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium) | ||||
| Taxonomic identifier | 107806 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera |
Protein attributes
| Sequence length | 690 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00255 |
| Subunit structure | Tetramer of two alpha and two beta subunits By similarity. |
| Subcellular location | |
| Sequence similarities | Belongs to the class-II aminoacyl-tRNA synthetase family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Protein biosynthesis |
| Cellular component | Cytoplasm |
| Ligand | ATP-binding Nucleotide-binding |
| Molecular function | Aminoacyl-tRNA synthetase Ligase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | arginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro glycyl-tRNA aminoacylationInferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | ATP binding Inferred from electronic annotation. Source: UniProtKB-KW arginine-tRNA ligase activityInferred from electronic annotation. Source: InterPro glycine-tRNA ligase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 690 | 690 | Glycine--tRNA ligase beta subunit HAMAP MF_00255 | PRO_0000072895 | |||
Sequences
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References
| [1] | "Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS." Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H. Nature 407:81-86(2000) [PubMed: 10993077] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: APS. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BA000003 Genomic DNA. Translation: BAB12853.1. |
| RefSeq | NP_239967.1. NC_002528.1. |
3D structure databases | |
| ProteinModelPortal | P57235. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | EBBUCT00000003306; EBBUCP00000003082; EBBUCG00000003306. |
| GeneID | 1109579. |
| GenomeReviews | Gene locus BU135 in contig BA000003_GR. |
| KEGG | buc:BU135. |
| PATRIC | 21243784. VBIBucAph127364_0144. |
Phylogenomic databases | |
| GeneTree | EBGT00050000007707. |
| HOGENOM | HBG586599. |
| OMA | FIRPVHT. |
| PhylomeDB | P57235. |
| ProtClustDB | PRK01233. |
Enzyme and pathway databases | |
| BioCyc | BSP107806:BU135-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00255. Gly_tRNA_synth_beta. [Tree] |
| InterPro | IPR008909. DALR_anticod-bd. IPR006194. Gly-tRNA-synth_II_heterodimer. IPR015944. Gly-tRNA-synth_IIc_bsu. [Graphical view] |
| KO | K01879. |
| Pfam | PF05746. DALR_1. 1 hit. PF02092. tRNA_synt_2f. 1 hit. [Graphical view] |
| PRINTS | PR01045. TRNASYNTHGB. |
| TIGRFAMs | TIGR00211. GlyS. 1 hit. |
| PROSITE | PS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | SYGB_BUCAI | ||||||||
| Accession | Primary (citable) accession number: P57235 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| Aminoacyl-tRNA synthetases List of aminoacyl-tRNA synthetase entries |
| Buchnera aphidicola (subsp. Acyrthosiphon pisum) Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names |
| SIMILARITY comments Index of protein domains and families |

Clusters with