P57186 (FLIR_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Flagellar biosynthetic protein fliR

Gene names

Name:	fliR
Ordered Locus Names:	BU084

Organism

Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)

Taxonomic identifier

107806 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Role in flagellar biosynthesis By similarity.
Subcellular location	Cell membrane; Multi-pass membrane protein Potential. Bacterial flagellum basal body By similarity.
Sequence similarities	Belongs to the fliR/mopE/spaR family.

Ontologies

Keywords
Cellular component	Bacterial flagellum Cell membrane Membrane
Domain	Transmembrane Transmembrane helix
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein targeting Inferred from electronic annotation. Source: InterPro
Cellular component	bacterial-type flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 258	258	Flagellar biosynthetic protein fliR		PRO_0000192051
Regions
	Transmembrane	10 – 32	23	Helical; Potential
	Transmembrane	44 – 66	23	Helical; Potential
	Transmembrane	71 – 93	23	Helical; Potential
	Transmembrane	128 – 150	23	Helical; Potential
	Transmembrane	154 – 172	19	Helical; Potential
	Transmembrane	179 – 201	23	Helical; Potential
	Transmembrane	211 – 233	23	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	P57186 [UniParc]. Last modified December 1, 2000. Version 1. Checksum: 72329B7DD5DF8437	FASTA	258	29,518
	10 20 30 40 50 60 MLTFNSLQLI TLISNFFWPM IRVLSFFSVA PIFKEKLINR KSKILLSGMI SWLVWPFLPE 70 80 90 100 110 120 VHTVLFSYFG FLLILQQILI GIVLGFTAQL LFATINLSGE IIGLQMGLSF ATFFNNNSQI 130 140 150 160 170 180 GTSIISRFLN ILALFVFITL NMHLYLISIV IDSFYSMPID GYFLNVNIFF ILLKFSSSIF 190 200 210 220 230 240 LNGLLLVLPI MIILLSISFV MSLLNRLSPQ ISIFSIGFPL NLILGMLMLY FLIPVMLPFL 250 KKILDDLIFF MNNNLLHI

References

[1]	"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS." Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H. Nature 407:81-86(2000) [PubMed: 10993077] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: APS.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BA000003 Genomic DNA. Translation: BAB12804.1.
RefSeq	NP_239918.1. NC_002528.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EBBUCT00000003174; EBBUCP00000002950; EBBUCG00000003174.
GeneID	1109488.
GenomeReviews	Gene locus BU084 in contig BA000003_GR.
KEGG	buc:BU084.
PATRIC	21243674. VBIBucAph127364_0090.
Phylogenomic databases
GeneTree	EBGT00050000007701.
HOGENOM	HBG700695.
OMA	QLNIFAI.
PhylomeDB	P57186.
ProtClustDB	CLSK315206.
Enzyme and pathway databases
BioCyc	BSP107806:BU084-MONOMER.
Family and domain databases
InterPro	IPR006303. FliR. IPR002010. T3SS_IM_R. [Graphical view]
KO	K02421.
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
TIGRFAMs	TIGR01400. FliR. 1 hit.
ProtoNet	Search...

Entry information

Entry name

FLIR_BUCAI

Accession

Primary (citable) accession number: P57186

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	December 1, 2000
Last modified:	January 25, 2012
This is version 63 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program