Reviewed, UniProtKB/Swiss-Prot P57186 (FLIR_BUCAI)

Names and origin

Protein names

Recommended name:
    Flagellar biosynthetic protein fliR

Gene names

Name:	fliR
Ordered Locus Names:	BU084

Organism

Buchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) [Complete proteome] [HAMAP]

Taxonomic identifier

118099 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	258 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	Role in flagellar biosynthesis By similarity.
Subcellular location	Cell membrane; Multi-pass membrane protein Potential. Bacterial flagellum basal body By similarity.
Sequence similarities	Belongs to the fliR/mopE/spaR family.

Ontologies

Keywords
Cellular component	Bacterial flagellum Cell membrane Membrane
Domain	Transmembrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein targeting Inferred from electronic annotation. Source: InterPro
Cellular component	bacterial-type flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell integral to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 258	258	Flagellar biosynthetic protein fliR		PRO_0000192051
Regions
	Transmembrane	10 – 32	23	Potential
	Transmembrane	44 – 66	23	Potential
	Transmembrane	71 – 93	23	Potential
	Transmembrane	128 – 150	23	Potential
	Transmembrane	154 – 172	19	Potential
	Transmembrane	179 – 201	23	Potential
	Transmembrane	211 – 233	23	Potential

Sequences

	Sequence		Length	Mass (Da)
	P57186-1 [UniParc]. Last modified December 1, 2000. Version 1. Checksum: 72329B7DD5DF8437	FASTA	258	29,518
	10 20 30 40 50 60 MLTFNSLQLI TLISNFFWPM IRVLSFFSVA PIFKEKLINR KSKILLSGMI SWLVWPFLPE 70 80 90 100 110 120 VHTVLFSYFG FLLILQQILI GIVLGFTAQL LFATINLSGE IIGLQMGLSF ATFFNNNSQI 130 140 150 160 170 180 GTSIISRFLN ILALFVFITL NMHLYLISIV IDSFYSMPID GYFLNVNIFF ILLKFSSSIF 190 200 210 220 230 240 LNGLLLVLPI MIILLSISFV MSLLNRLSPQ ISIFSIGFPL NLILGMLMLY FLIPVMLPFL 250 KKILDDLIFF MNNNLLHI

References

[1]	"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS." Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H. Nature 407:81-86(2000) [PubMed: 10993077] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tokyo 1998.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BA000003 Genomic DNA. Translation: BAB12804.1.
RefSeq	NP_239918.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1109488.
GenomeReviews	Gene locus BU084 in contig BA000003_GR.
KEGG	buc:BU084.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	P57186.
OMA	PQLNIFA
Enzyme and pathway databases
BioCyc	BSP107806:BU084-MON.
Family and domain databases
InterPro	IPR006303. FliR. IPR002010. T3SS_IM_R. [Graphical view]
Pfam	PF01311. Bac_export_1. 1 hit. [Graphical view]
PRINTS	PR00953. TYPE3IMRPROT.
TIGRFAMs	TIGR01400. fliR. 1 hit.
ProtoNet	Search...

Entry information

Entry name

FLIR_BUCAI

Accession

Primary (citable) accession number: P57186

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	December 1, 2000
Last modified:	November 3, 2009
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)