Reviewed, UniProtKB/Swiss-Prot P57182 (FLIM_BUCAI)

Names and origin

Protein names

Recommended name:
    Flagellar motor switch protein fliM

Gene names

Name:	fliM
Ordered Locus Names:	BU080

Organism

Buchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) [Complete proteome] [HAMAP]

Taxonomic identifier

118099 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Buchnera

Protein attributes

Sequence length	315 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Inferred from homology.

General annotation (Comments)

Function	FliM is one of three proteins (fliG, fliN, fliM) that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with the cheY and cheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation By similarity.
Subcellular location	Cell membrane; Peripheral membrane protein By similarity. Bacterial flagellum basal body By similarity.
Sequence similarities	Belongs to the fliM family.

Ontologies

Keywords
Biological process	Chemotaxis Flagellar rotation
Cellular component	Bacterial flagellum Cell membrane Membrane
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	chemotaxis Inferred from electronic annotation. Source: UniProtKB-KW ciliary or flagellar motility Inferred from electronic annotation. Source: UniProtKB-KW
Cellular component	bacterial-type flagellum basal body Inferred from electronic annotation. Source: UniProtKB-SubCell extrinsic to membrane Inferred from electronic annotation. Source: UniProtKB-SubCell plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 315	315	Flagellar motor switch protein fliM		PRO_0000180924

Sequences

	Sequence		Length	Mass (Da)
	P57182-1 [UniParc]. Last modified December 1, 2000. Version 1. Checksum: FE5CC11D9573F198	FASTA	315	36,940
	10 20 30 40 50 60 MLACLLITFT CEACKMGESK NLHDEIKILE KINRHFSDEF TKFFSNFLKN SVELVSCSIK 70 80 90 100 110 120 IGSCTSNKEI ITNLRCLNLI EILPYKKKSF IIFPYNFLSN IIDILFGGQG DFKDHTKKIR 130 140 150 160 170 180 DITSTESLVN KKIMKFITNA FSEIYKKYFV KEINFFNTKT FFDFKKYNFD LNKLFLINCF 190 200 210 220 230 240 NFKINNTEIF FNFLIPKSIL KYQNEKKFFS TYDSHKNTCI EKNIENKVSL NDIYNVEVNI 250 260 270 280 290 300 ISKIIGISVS YDKIYNLSIG DVLSIKKPNK ITGFIQDQAI FLGNYKRFNE QSIIFIEEFI 310 DSSSESNQDK EYSNE

References

[1]	"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS." Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H. Nature 407:81-86(2000) [PubMed: 10993077] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tokyo 1998.

Cross-references

Sequence databases
EMBLGenBankDDBJ	BA000003 Genomic DNA. Translation: BAB12800.1.
RefSeq	NP_239914.1.
3D structure databases
ModBase	Search...
Genome annotation databases
GeneID	1109484.
GenomeReviews	Gene locus BU080 in contig BA000003_GR.
KEGG	buc:BU080.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG366209.
OMA	VEVNIIS.
Enzyme and pathway databases
BioCyc	BSP107806:BU080-MON.
Family and domain databases
InterPro	IPR001543. SpoA. [Graphical view]
Pfam	PF01052. SpoA. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

FLIM_BUCAI

Accession

Primary (citable) accession number: P57182

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	December 1, 2000
Last modified:	December 15, 2009
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

HAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)