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P57149 (RL1_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 79. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length231 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release By similarity. HAMAP-Rule MF_01318

Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA By similarity. HAMAP-Rule MF_01318

Subunit structure

Part of the 50S ribosomal subunit By similarity. HAMAP-Rule MF_01318

Sequence similarities

Belongs to the ribosomal protein L1P family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 23123150S ribosomal protein L1 HAMAP-Rule MF_01318
PRO_0000125630

Sequences

Sequence LengthMass (Da)Tools
P57149 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: 82E657C4B28DC27E

FASTA23125,485
        10         20         30         40         50         60 
MNKKTKRMKK IKEHINFAKL HHIDETIDLL KKSSTVKFNE SIDIAINLGI NSKKSDQNIR 

        70         80         90        100        110        120 
SSTVLPNGIG RSIRVAVFTQ GDNIAIAKDA GAELIGMEDL SEKIKKEGVD FDVVIATPDA 

       130        140        150        160        170        180 
MKIVTQLGQI LGPRNLMPNT KLGTITTNIA EAIKNAKTGQ VRYRNDKNGI IHATIGRINF 

       190        200        210        220        230 
HKNEIKENLN VFLESIKKAK PPQSKGIYIK KIVLSTTMGV GLMVDQSTLS L 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000003 Genomic DNA. Translation: BAB12764.1.
RefSeqNP_239878.1. NC_002528.1.

3D structure databases

ProteinModelPortalP57149.
SMRP57149. Positions 6-227.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAB12764; BAB12764; BAB12764.
GeneID1109545.
KEGGbuc:BU037.
PATRIC21243580. VBIBucAph127364_0050.

Phylogenomic databases

eggNOGCOG0081.
HOGENOMHOG000207015.
KOK02863.
OMAMAGKKYR.
OrthoDBEOG6FBX2G.

Enzyme and pathway databases

BioCycBAPH107806:GBZJ-37-MONOMER.

Family and domain databases

Gene3D3.30.190.20. 2 hits.
3.40.50.790. 1 hit.
HAMAPMF_01318_B. Ribosomal_L1_B.
InterProIPR005878. Ribosom_L1_bac-type.
IPR002143. Ribosomal_L1.
IPR023674. Ribosomal_L1-like.
IPR028364. Ribosomal_L1/biogenesis.
IPR016094. Ribosomal_L1_2-a/b-sand.
IPR016095. Ribosomal_L1_3-a/b-sand.
IPR023673. Ribosomal_L1_CS.
[Graphical view]
PfamPF00687. Ribosomal_L1. 1 hit.
[Graphical view]
PIRSFPIRSF002155. Ribosomal_L1. 1 hit.
SUPFAMSSF56808. SSF56808. 1 hit.
TIGRFAMsTIGR01169. rplA_bact. 1 hit.
PROSITEPS01199. RIBOSOMAL_L1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL1_BUCAI
AccessionPrimary (citable) accession number: P57149
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: May 14, 2014
This is version 79 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names