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Reviewed, UniProtKB/Swiss-Prot P57147 (RL7_BUCAI)

Last modified November 24, 2009. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    50S ribosomal protein L7/L12
Gene names
Name: rplL
Ordered Locus Names: BU035
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon pisum symbiotic bacterium) [Complete proteome] [HAMAP]
Taxonomic identifier118099 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length122 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation By similarity.

Sequence similarities

Belongs to the ribosomal protein L12P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 12212250S ribosomal protein L7/L12 HAMAP MF_00368
PRO_0000157510

Sequences

Sequence LengthMass (Da)Tools
P57147-1 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: 89270FAB8805BDAD

FASTA12213,439
        10         20         30         40         50         60 
MSITKEQILE AISEMSVMNV VDLITAMEEK FGVSASMSIN SNNHNEKDLR EEKTEFDIFL 

        70         80         90        100        110        120 
KVIGPNKVSV IKTVRSATGL GLKEAKDLVE SAPTVLKENI SKEDAESLKK TLEDVGAEIE 


IK 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed: 10993077] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tokyo 1998.

Cross-references

Sequence databases

BA000003 Genomic DNA. Translation: BAB12762.1.
RefSeqNP_239876.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID1109543.
GenomeReviewsGene locus BU035 in contig BA000003_GR.
KEGGbuc:BU035.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMP57147.
OMAAISEMSI

Enzyme and pathway databases

BioCycBSP107806:BU035-MON.

Family and domain databases

HAMAPMF_00368.
[Tree]
InterProIPR000206. Ribosomal_L7/12.
IPR014719. Ribosomal_L7/12_C/ClpS-like.
IPR013823. Ribosomal_L7/L12_C.
IPR008932. Ribosomal_L7/L12_oligo.
[Graphical view]
Gene3DG3DSA:3.30.1390.10. Ribosomal_L7/12_C/ClpS-like. 1 hit.
PfamPF00542. Ribosomal_L12. 1 hit.
[Graphical view]
ProDomPD001326. Ribosomal_L7/L12_C. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR00855. L12. 1 hit.
ProtoNetSearch...

Entry information

Entry nameRL7_BUCAI
AccessionPrimary (citable) accession number: P57147
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: November 24, 2009
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names

Ribosomal proteins

Ribosomal proteins families and list of entries

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents