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P57133 (EFP_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Elongation factor P

Short name=EF-P
Gene names
Name:efp
Ordered Locus Names:BU020
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifier107806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length189 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase By similarity. HAMAP MF_00141

Pathway

Protein biosynthesis; polypeptide chain elongation. HAMAP MF_00141

Sequence similarities

Belongs to the elongation factor P family.

Sequence caution

The sequence BAB12747.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Molecular functionElongation factor
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processpeptide biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: InterPro

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 189189Elongation factor P HAMAP MF_00141
PRO_0000094215

Sequences

Sequence LengthMass (Da)Tools
P57133 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: B676EBE1497595A1

FASTA18921,721
        10         20         30         40         50         60 
MRIYHSNNFR SGRKIIFENE PCLIESSEFV KPGKGQSFVR VKLRKLLTKQ LIEKTFKSTD 

        70         80         90        100        110        120 
SLEIADIIEY TLSYLYNDGR FWYFINNNTF EELSVDEKII GVHKKWLLEQ DTCIVTLWNN 

       130        140        150        160        170        180 
QPISITPNNF VNLKVIHVQA TLKGDTINTS STKLATLSTG AIVRVPLFIQ VGSLIKVDTR 


SGEYVSRIK 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed: 10993077] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000003 Genomic DNA. Translation: BAB12747.1. Different initiation.
RefSeqNP_239861.1. NC_002528.1.

3D structure databases

ProteinModelPortalP57133.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBUCT00000003279; EBBUCP00000003055; EBBUCG00000003279.
GeneID1109528.
GenomeReviewsGene locus BU020 in contig BA000003_GR.
KEGGbuc:BU020.
PATRIC21243544. VBIBucAph127364_0032.

Phylogenomic databases

GeneTreeEBGT00050000008046.
HOGENOMHBG303311.
OMAMISSNDF.
PhylomeDBP57133.
ProtClustDBPRK00529.

Enzyme and pathway databases

BioCycBSP107806:BU020-MONOMER.

Family and domain databases

HAMAPMF_00141. EF-P.
[Tree]
InterProIPR015365. Elong-fact-P_C.
IPR012340. NA-bd_OB-fold.
IPR016027. NA-bd_OB-fold-like.
IPR020599. Transl_elong_fac_P/YeiP.
IPR013185. Transl_elong_KOW-like.
IPR001059. Transl_elong_P/YeiP_cen.
IPR013852. Transl_elong_P/YeiP_CS.
IPR011768. Transl_elongation_fac_P.
IPR014722. Transl_SH3-like_sub.
IPR008991. Translation_prot_SH3-like.
[Graphical view]
Gene3DG3DSA:2.40.50.140. OB_NA_bd_sub. 2 hits.
G3DSA:2.30.30.30. Ribosomal_L2. 1 hit.
KOK02356.
PfamPF01132. EFP. 1 hit.
PF08207. EFP_N. 1 hit.
PF09285. Elong-fact-P_C. 1 hit.
[Graphical view]
PIRSFPIRSF005901. EF-P. 1 hit.
SMARTSM00841. Elong-fact-P_C. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 2 hits.
SSF50104. Transl_SH3_like. 1 hit.
TIGRFAMsTIGR00038. Efp. 1 hit.
PROSITEPS01275. EFP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFP_BUCAI
AccessionPrimary (citable) accession number: P57133
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: January 25, 2012
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names

PATHWAY comments

Index of metabolic and biosynthesis pathways

SIMILARITY comments

Index of protein domains and families