Skip Header

Contribute Send feedback
Read comments (?) or add your own

P57129 (RL34_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 47. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
50S ribosomal protein L34
Gene names
Name:rpmH
Ordered Locus Names:BU013
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifier107806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length47 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L34P family.

Ontologies

Keywords
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: InterPro

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionstructural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 474750S ribosomal protein L34 HAMAP MF_00391
PRO_0000187355

Sequences

Sequence LengthMass (Da)Tools
P57129 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: B92A0C15E3108026

FASTA475,675
        10         20         30         40 
MKRTFQPSIL KRNRSHGFRI RMATKNGRYI LSRRRAKLRT RLTVSSK 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed: 10993077] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000003 Genomic DNA. Translation: BAB12741.1.
RefSeqNP_239855.1. NC_002528.1.

3D structure databases

ProteinModelPortalP57129.
SMRP57129. Positions 1-46.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBUCT00000003155; EBBUCP00000002931; EBBUCG00000003155.
GeneID1109522.
GenomeReviewsGene locus BU013 in contig BA000003_GR.
KEGGbuc:BU013.
PATRIC21243530. VBIBucAph127364_0026.

Phylogenomic databases

GeneTreeEBGT00050000007784.
HOGENOMHBG729750.
ProtClustDBPRK00399.

Enzyme and pathway databases

BioCycBSP107806:BU013-MONOMER.

Family and domain databases

HAMAPMF_00391. Ribosomal_L34.
[Tree]
InterProIPR000271. Ribosomal_L34.
IPR020939. Ribosomal_L34_CS.
[Graphical view]
KOK02914.
PANTHERPTHR14503. PTHR14503. 1 hit.
PfamPF00468. Ribosomal_L34. 1 hit.
[Graphical view]
ProDomPD003101. Ribosomal_L34. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsTIGR01030. RpmH_bact. 1 hit.
PROSITEPS00784. RIBOSOMAL_L34. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRL34_BUCAI
AccessionPrimary (citable) accession number: P57129
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: January 25, 2012
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names

SIMILARITY comments

Index of protein domains and families