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P57124 (ATPB_BUCAI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 81. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP synthase subunit beta

EC=3.6.3.14
Alternative name(s):
ATP synthase F1 sector subunit beta
F-ATPase subunit beta
Gene names
Name:atpD
Ordered Locus Names:BU008
OrganismBuchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (Acyrthosiphon pisum symbiotic bacterium)
Taxonomic identifier107806 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeBuchnera

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits By similarity. HAMAP MF_01347

Catalytic activity

ATP + H2O + H+(In) = ADP + phosphate + H+(Out). HAMAP MF_01347

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has three main subunits: a1, b2 and c(9-12). The alpha and beta chains form an alternating ring which encloses part of the gamma chain. CF1 is attached to CF0 by a central stalk formed by the gamma and epsilon chains, while a peripheral stalk is formed by the delta and b chains By similarity.

Subcellular location

Cell membrane; Peripheral membrane protein By similarity HAMAP MF_01347.

Sequence similarities

Belongs to the ATPase alpha/beta chains family.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 465465ATP synthase subunit beta HAMAP MF_01347
PRO_0000144426

Regions

Nucleotide binding155 – 1628ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
P57124 [UniParc].

Last modified December 1, 2000. Version 1.
Checksum: 89CB775CC8F8172B

FASTA46551,311
        10         20         30         40         50         60 
MATGKIIQII GAVVDVEFNQ DSVPKIYNAL EVKNKQYKLI LEVQQQLGSG VVRTIAMGSS 

        70         80         90        100        110        120 
NGLKRGLIVT DLGHYIKVPV GEATLGRIIN VLGETIDNKG ALKNNQSDKI EYWEIHRSPP 

       130        140        150        160        170        180 
SYRDQASCRE ILETGIKVID LICPFSKGGK VGLFGGAGVG KTVNMMELIR NIAVEHSGYS 

       190        200        210        220        230        240 
VFTGVGERTR EGNDFYHEMN DSQVLDKVSL VYGQMNEPPG NRLRVAFTGL TIAEKFRDEG 

       250        260        270        280        290        300 
KDVLLFIDNI YRYTLAGTEV SALLGRMPSA VGYQPTLAEE MGLLQERITS TKNGSITSVQ 

       310        320        330        340        350        360 
AVYVPADDLT DPSPATTFAH LDSTVTLSRQ IASLGIYPAI DPLNSTSRQL DPYIVGDEHY 

       370        380        390        400        410        420 
ETALGVQSIL QRYQELKDII AILGMDELAE KDKLLVSRAR KIQRFLSQPF FVAEVFTGFP 

       430        440        450        460 
GKYVSLKDNI RAFKGIIKGE FDDLPEQAFY MVGSIEEVIE KAKKL 

« Hide

References

[1]"Genome sequence of the endocellular bacterial symbiont of aphids Buchnera sp. APS."
Shigenobu S., Watanabe H., Hattori M., Sakaki Y., Ishikawa H.
Nature 407:81-86(2000) [PubMed: 10993077] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: APS.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BA000003 Genomic DNA. Translation: BAB12736.1.
RefSeqNP_239850.1. NC_002528.1.

3D structure databases

ProteinModelPortalP57124.
SMRP57124. Positions 4-465.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBUCT00000002962; EBBUCP00000002738; EBBUCG00000002962.
GeneID1109517.
GenomeReviewsGene locus BU008 in contig BA000003_GR.
KEGGbuc:BU008.
PATRIC21243520. VBIBucAph127364_0021.

Phylogenomic databases

GeneTreeEBGT00050000007862.
HOGENOMHBG565875.
OMAIGQEHYD.
PhylomeDBP57124.
ProtClustDBPRK09280.

Enzyme and pathway databases

BioCycBSP107806:BU008-MONOMER.

Family and domain databases

HAMAPMF_01347. ATP_synth_beta_bact.
[Tree]
InterProIPR020003. ATPase_a/bsu_AS.
IPR003593. ATPase_AAA+_core.
IPR005722. ATPase_F1-cplx_bsu.
IPR018118. ATPase_F1/A1-cplx_a/bsu_N.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR004100. ATPase_F1/V1/A1-cplx_a/bsu_N.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR024034. ATPase_F1_bsu/V1_C.
[Graphical view]
Gene3DG3DSA:1.10.1140.10. G3DSA:1.10.1140.10. 1 hit.
KOK02112.
PANTHERPTHR15184:SF8. ATPase_F1_b. 1 hit.
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47917. ATPase_a/b_C. 1 hit.
SSF50615. ATPase_a/b_N. 1 hit.
TIGRFAMsTIGR01039. AtpD. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameATPB_BUCAI
AccessionPrimary (citable) accession number: P57124
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: December 1, 2000
Last modified: January 25, 2012
This is version 81 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Buchnera aphidicola (subsp. Acyrthosiphon pisum)

Buchnera aphidicola (subsp. Acyrthosiphon pisum): entries and gene names

SIMILARITY comments

Index of protein domains and families