P56937 (DHB7_HUMAN) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 119.
History...
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Alt products·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: 3-keto-steroid reductase EC=1.1.1.270 Alternative name(s): 17-beta-hydroxysteroid dehydrogenase 7 Short name=17-beta-HSD 7 Estradiol 17-beta-dehydrogenase 7 EC=1.1.1.62 | ||||
| Gene names |
| ||||
| Organism | Homo sapiens (Human) | ||||
| Taxonomic identifier | 9606 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Protein attributes
| Sequence length | 341 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at protein level |
General annotation (Comments)
| Function | Responsible for the reduction of the keto group on the C-3 of sterols. Ref.11 |
| Catalytic activity | 4-alpha-methyl-5-alpha-cholest-7-en-3-beta-ol + NADP+ = 4-alpha-methyl-5-alpha-cholest-7-en-3-one + NADPH. Estradiol-17-beta + NAD(P)+ = estrone + NAD(P)H. |
| Pathway | Steroid biosynthesis; estrogen biosynthesis. Steroid biosynthesis; zymosterol biosynthesis; zymosterol from lanosterol: step 5/6. |
| Subcellular location | |
| Tissue specificity | Highly expressed in adrenal gland, liver, lung and thymus. Expressed in breast, ovaries, pituitary gland, pregnant uterus, prostate, kidney, lymph node, small intestine, spinal cord and trachea. Weakly expressed in all other tissues tested. Isoform 3 is expressed in eye ciliary epithelial cells and neuroendocrine cells. |
| Post-translational modification | Phosphorylated. |
| Sequence similarities | Belongs to the short-chain dehydrogenases/reductases (SDR) family. ERG27 subfamily. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Lipid synthesis Steroid biosynthesis |
| Cellular component | Cell membrane Membrane |
| Coding sequence diversity | Alternative splicing |
| Domain | Transmembrane Transmembrane helix |
| Ligand | NAD NADP |
| Molecular function | Oxidoreductase |
| PTM | Acetylation Glycoprotein |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Biological process | cholesterol biosynthetic process Traceable author statement. Source: Reactome |
| Cellular component | endoplasmic reticulum membrane Traceable author statement. Source: Reactome integral to membraneInferred from electronic annotation. Source: UniProtKB-KW plasma membraneInferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | 3-keto sterol reductase activity Inferred from electronic annotation. Source: EC estradiol 17-beta-dehydrogenase activityTraceable author statement. Source: ProtInc nucleotide bindingInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Alternative products
| This entry describes 3 isoforms produced by alternative splicing. [Align] [Select] | ||||||
| Isoform 1 (identifier: P56937-1) This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry. | ||||||
| Isoform 2 (identifier: P56937-2) The sequence of this isoform differs from the canonical sequence as follows: 112-119: Missing. | ||||||
| Isoform 3 (identifier: P56937-3) The sequence of this isoform differs from the canonical sequence as follows: 215-249: Missing. |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Chain | 1 – 341 | 341 | 3-keto-steroid reductase | PRO_0000054586 | |||||
Regions | |||||||||
| Topological domain | 1 – 229 | 229 | Extracellular Potential | ||||||
| Transmembrane | 230 – 250 | 21 | Helical; Potential | ||||||
| Topological domain | 251 – 341 | 91 | Cytoplasmic Potential | ||||||
| Nucleotide binding | 8 – 15 | 8 | NAD Potential | ||||||
Sites | |||||||||
| Active site | 193 | 1 | Proton acceptor By similarity | ||||||
| Binding site | 171 | 1 | Substrate By similarity | ||||||
Amino acid modifications | |||||||||
| Modified residue | 321 | 1 | N6-acetyllysine Ref.12 | ||||||
| Glycosylation | 37 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 178 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 229 | 1 | N-linked (GlcNAc...) Potential | ||||||
Natural variations | |||||||||
| Alternative sequence | 112 – 119 | 8 | Missing in isoform 2. | VSP_006029 | |||||
| Alternative sequence | 215 – 249 | 35 | Missing in isoform 3. | VSP_012766 | |||||
Experimental info | |||||||||
| Sequence conflict | 52 – 53 | 2 | HP → PT in AAF14537. Ref.1 | ||||||
| Sequence conflict | 61 | 1 | Q → P in AAF14537. Ref.1 | ||||||
| Sequence conflict | 86 | 1 | C → R in CAC88111. Ref.3 | ||||||
| Sequence conflict | 105 | 1 | F → L in CAC88111. Ref.3 | ||||||
| Sequence conflict | 135 | 1 | L → F in AAP97275. Ref.4 | ||||||
| Sequence conflict | 273 – 276 | 4 | HQKP → PPKA in AAP97275. Ref.4 | ||||||
| Sequence conflict | 288 – 295 | 8 | ATTGFGRN → GTTALEEI in AAP97275. Ref.4 | ||||||
Sequences
| ||||||||||||||||||||||||||||||
References
| « Hide 'large scale' references | |
| [1] | "Determination of cDNA, gene structure and chromosomal localization of the novel human 17beta-hydroxysteroid dehydrogenase type 7." Krazeisen A., Breitling R., Imai K., Fritz S., Moeller G., Adamski J. FEBS Lett. 460:373-379(1999) [PubMed: 10544267] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1 AND 2). |
| [2] | Krazeisen A., Breitling R., Imai K., Fritz S., Moeller G., Adamski J. Submitted (JAN-2000) to the EMBL/GenBank/DDBJ databases Cited for: SEQUENCE REVISION. |
| [3] | "Production, purification, and functional analysis of recombinant human and mouse 17beta-hydroxysteroid dehydrogenase type 7." Toern S., Nokelainen P., Kurkela R., Pulkka A., Menjivar M., Ghosh S., Coca-Prados M., Peltoketo H., Isomaa V., Vihko P. Biochem. Biophys. Res. Commun. 305:37-45(2003) [PubMed: 12732193] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA] (ISOFORMS 1 AND 3). Tissue: Placenta. |
| [4] | "Cloning of a new human cDNA homologous to Rattus norvegicus ovarian-specific protein." Zhou Y., Yu L., Zhao S.Y. Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1). |
| [5] | "The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment." Clark H.F., Gurney A.L., Abaya E., Baker K., Baldwin D.T., Brush J., Chen J., Chow B., Chui C., Crowley C., Currell B., Deuel B., Dowd P., Eaton D., Foster J.S., Grimaldi C., Gu Q., Hass P.E. Gray A.M.Genome Res. 13:2265-2270(2003) [PubMed: 12975309] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [6] | "Complete sequencing and characterization of 21,243 full-length human cDNAs." Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. Sugano S.Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. |
| [7] | "Cloning of human full-length CDSs in BD Creator(TM) system donor vector." Kalnine N., Chen X., Rolfs A., Halleck A., Hines L., Eisenstein S., Koundinya M., Raphael J., Moreira D., Kelley T., LaBaer J., Lin Y., Phelan M., Farmer A. Submitted (MAY-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). |
| [8] | "The DNA sequence and biological annotation of human chromosome 1." Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A., Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C., Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K. Bentley D.R.Nature 441:315-321(2006) [PubMed: 16710414] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [9] | Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. Venter J.C.Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. |
| [10] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1). Tissue: Skin and Urinary bladder. |
| [11] | "Closing the gap: identification of human 3-ketosteroid reductase, the last unknown enzyme of mammalian cholesterol biosynthesis." Marijanovic Z., Laubner D., Moeller G., Gege C., Husen B., Adamski J., Breitling R. Mol. Endocrinol. 17:1715-1725(2003) [PubMed: 12829805] [Abstract] Cited for: CHARACTERIZATION, FUNCTION. |
| [12] | "Lysine acetylation targets protein complexes and co-regulates major cellular functions." Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T., Olsen J.V., Mann M. Science 325:834-840(2009) [PubMed: 19608861] [Abstract] Cited for: ACETYLATION [LARGE SCALE ANALYSIS] AT LYS-321, MASS SPECTROMETRY. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF098786 mRNA. Translation: AAF09266.2. AF162767 AF162766 Genomic DNA. Translation: AAF14537.1.AJ249179 mRNA. Translation: CAC20418.1. AJ250550 AJ250558 Genomic DNA. Translation: CAC88111.1.AF145023 mRNA. Translation: AAP97275.1. AY358962 mRNA. Translation: AAQ89321.1. AK290741 mRNA. Translation: BAF83430.1. BT007075 mRNA. Translation: AAP35738.1. AL392003, AL445197 Genomic DNA. Translation: CAI13457.1. AL445197, AL392003 Genomic DNA. Translation: CAI15947.1. CH471067 Genomic DNA. Translation: EAW90716.1. BC007068 mRNA. Translation: AAH07068.1. BC065246 mRNA. Translation: AAH65246.1. |
| IPI | IPI00011970. IPI00220886. IPI00807691. |
| RefSeq | NP_057455.1. NM_016371.2. |
| UniGene | Hs.492925. |
3D structure databases | |
| ProteinModelPortal | P56937. |
| SMR | P56937. Positions 2-274. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | P56937. 5 interactions. |
| STRING | P56937. |
PTM databases | |
| PhosphoSite | P56937. |
Polymorphism databases | |
| DMDM | 8134404. |
Proteomic databases | |
| PRIDE | P56937. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| Ensembl | ENST00000254521; ENSP00000254521; ENSG00000132196. |
| GeneID | 51478. |
| KEGG | hsa:51478. |
| UCSC | uc001gci.1. human. |
Organism-specific databases | |
| CTD | 51478. |
| GeneCards | GC01P162760. |
| H-InvDB | HIX0001267. |
| HGNC | HGNC:5215. HSD17B7. |
| MIM | 606756. gene. |
| neXtProt | NX_P56937. |
| PharmGKB | PA29483. |
| GenAtlas | Search... |
Phylogenomic databases | |
| eggNOG | prNOG18285. |
| HOGENOM | HBG505235. |
| HOVERGEN | HBG058236. |
| InParanoid | P56937. |
| OMA | TGFGSNY. |
| PhylomeDB | P56937. |
Enzyme and pathway databases | |
| BioCyc | MetaCyc:ENSG00000132196-MONOMER. |
| Reactome | REACT_22258. Metabolism of lipids and lipoproteins. |
Gene expression databases | |
| ArrayExpress | P56937. |
| Bgee | P56937. |
| CleanEx | HS_HSD17B7. |
| Genevestigator | P56937. |
| GermOnline | ENSG00000132196. Homo sapiens. |
Family and domain databases | |
| InterPro | IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| KO | K13373. |
| Pfam | PF00106. adh_short. 1 hit. [Graphical view] |
| PRINTS | PR00081. GDHRDH. |
| PROSITE | PS00061. ADH_SHORT. False negative. [Graphical view] |
| ProtoNet | Search... |
Other | |
| DrugBank | DB00157. NADH. |
| NextBio | 55124. |
| SOURCE | Search... |
Entry information
| Entry name | DHB7_HUMAN | ||||||||
| Accession | Primary (citable) accession number: P56937 Secondary accession number(s): Q5T246 Q9UF00 | ||||||||
| Entry history |
| ||||||||
| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
| Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. | ||||||||
Relevant documents
| Human chromosome 1 Human chromosome 1: entries, gene names and cross-references to MIM |
| MIM cross-references Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot |
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with